RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 LAG3P18627 525 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 ARL2P36404 184 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 UBE3AQ05086 875 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 ADAM15Q13444 863 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 TTC38Q5R3I4 469 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 SRGAP1Q7Z6B7 1085 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 THNSL1Q8IYQ7 743 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 LRRC43Q8N309 656 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 RNF149Q8NC42 400 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 ASAP3Q8TDY4 903 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 TCP11Q8WWU5 503 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 KHSRPQ92945 711 aaKnown RBP eCLIP16.33■□□□□ 0.2
FANCA-220ENST00000566409 FAM105AQ9NUU6 356 aa16.33■□□□□ 0.2
FANCA-220ENST00000566409 FSCN2O14926 492 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 DGAT1O75907 488 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 XRCC6P12956 609 aaKnown RBP eCLIP16.32■□□□□ 0.2
FANCA-220ENST00000566409 PTENP60484 403 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 PLCB3Q01970 1234 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 ORC2Q13416 577 aaPredicted RBP16.32■□□□□ 0.2
FANCA-220ENST00000566409 RBM23Q86U06 439 aaKnown RBP16.32■□□□□ 0.2
FANCA-220ENST00000566409 FAM178BQ8IXR5 827 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 ABI1Q8IZP0 508 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 TLR9Q9NR96 1032 aa16.32■□□□□ 0.2
FANCA-220ENST00000566409 OFD1O75665 1012 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 GLP2RO95838 553 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 GLRA2P23416 452 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 NRIP1P48552 1158 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 TRAPPC10P48553 1259 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
FANCA-220ENST00000566409 CAPSQ13938 189 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 CLUL1Q15846 466 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 ECM1Q16610 540 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 CSPP1Q1MSJ5 1256 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 POTEGQ6S5H5 508 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 AGMOQ6ZNB7 445 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 MRPL10Q7Z7H8 261 aaKnown RBP16.31■□□□□ 0.2
FANCA-220ENST00000566409 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
FANCA-220ENST00000566409 SLC39A11Q8N1S5 342 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 MRPS27Q92552 414 aaKnown RBP16.31■□□□□ 0.2
FANCA-220ENST00000566409 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 POLR3CQ9BUI4 534 aaPredicted RBP16.31■□□□□ 0.2
FANCA-220ENST00000566409 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 GPRC5CQ9NQ84 441 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 PCDHB2Q9Y5E7 798 aa16.31■□□□□ 0.2
FANCA-220ENST00000566409 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 PER2O15055 1255 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 ST18O60284 1047 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 B4GALT3O60512 393 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 TSPAN1O60635 241 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 RPA1P27694 616 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
FANCA-220ENST00000566409 POU5F1BQ06416 359 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
FANCA-220ENST00000566409 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
FANCA-220ENST00000566409 AMHR2Q16671 573 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 PUS10Q3MIT2 529 aaKnown RBP16.3■□□□□ 0.2
FANCA-220ENST00000566409 TMEM173Q86WV6 379 aaPredicted RBP16.3■□□□□ 0.2
FANCA-220ENST00000566409 EFHBQ8N7U6 833 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 VN1R2Q8NFZ6 395 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 MICAL1Q8TDZ2 1067 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 MSLNLQ96KJ4 702 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 TBC1D32Q96NH3 1257 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
FANCA-220ENST00000566409 DBR1Q9UK59 544 aaKnown RBP16.3■□□□□ 0.2
FANCA-220ENST00000566409 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 USO1O60763 962 aaKnown RBP16.29■□□□□ 0.2
FANCA-220ENST00000566409 SKIP12755 728 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
FANCA-220ENST00000566409 RAB27AP51159 221 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 BCAR1P56945 870 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 MBTD1Q05BQ5 628 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 PTGDRQ13258 359 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 IL17AQ16552 155 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
FANCA-220ENST00000566409 NACC1Q96RE7 527 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 EIF2AQ9BY44 585 aaKnown RBP16.29■□□□□ 0.2
FANCA-220ENST00000566409 MRPL9Q9BYD2 267 aaKnown RBP16.29■□□□□ 0.2
FANCA-220ENST00000566409 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
FANCA-220ENST00000566409 NRDE2Q9H7Z3 1164 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 TLE6Q9H808 572 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 SPG21Q9NZD8 308 aa16.29■□□□□ 0.2
FANCA-220ENST00000566409 MBTPS2O43462 519 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 KCNC3Q14003 757 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 DUSP6Q16828 381 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 NOMO2Q5JPE7 1267 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 PLPP4Q5VZY2 271 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 GLB1LQ6UWU2 654 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 ZNF280BQ86YH2 543 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
FANCA-220ENST00000566409 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 CPB2Q96IY4 423 aa16.28■□□□□ 0.2
FANCA-220ENST00000566409 TCF25Q9BQ70 676 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms