RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ST3GAL5Q9UNP4 418 aa23.95■■□□□ 1.42
SNX1-206ENST00000559389 MICAL3Q7RTP6 2002 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 FRMD3A2A2Y4 597 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 ACTN1P12814 892 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 FGFR4P22455 802 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 AFMP43652 599 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 CNNM3Q8NE01 707 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 PAGE5Q96GU1 130 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 ARHGAP28Q9P2N2 729 aa23.94■■□□□ 1.42
SNX1-206ENST00000559389 PHLPP2Q6ZVD8 1323 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 INO80B-WBP1J3KQ70 363 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 NR1I2O75469 434 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 BAIAP3O94812 1187 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 FGBP02675 491 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 ASIC1P78348 528 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 NFX1Q12986 1120 aaKnown RBP23.93■■□□□ 1.42
SNX1-206ENST00000559389 PCBP1Q15365 356 aaKnown RBP eCLIP23.93■■□□□ 1.42
SNX1-206ENST00000559389 C9orf50Q5SZB4 431 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 CHRDL2Q6WN34 429 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 FAM43BQ6ZT52 329 aaPredicted RBP23.93■■□□□ 1.42
SNX1-206ENST00000559389 HERVK_113Q902F9 699 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 NTPCRQ9BSD7 190 aaKnown RBP23.93■■□□□ 1.42
SNX1-206ENST00000559389 CCDC113Q9H0I3 377 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 TMX1Q9H3N1 280 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 ZHX3Q9H4I2 956 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 KMT5AQ9NQR1 393 aa23.93■■□□□ 1.42
SNX1-206ENST00000559389 CCDC169A6NNP5 214 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 IDEP14735 1019 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 GAP43P17677 238 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 CASP1P29466 404 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 NCKAP1LP55160 1127 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 PPP4R3CPQ6ZMV5 832 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 OTOP2Q7RTS6 562 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 CATSPER4Q7RTX7 472 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 SFR1Q86XK3 245 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 MYCT1Q8N699 235 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 LINC01599Q8WXQ3 324 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 KCNN1Q92952 543 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 FIZ1Q96SL8 496 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 FTHL17Q9BXU8 183 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 BLZF1Q9H2G9 400 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 AGPAT5Q9NUQ2 364 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 SEL1LQ9UBV2 794 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 KCNG1Q9UIX4 513 aa23.92■■□□□ 1.42
SNX1-206ENST00000559389 ABHD14A-ACY1A0A1B0GW23 586 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 SLC16A4O15374 487 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 EFCAB14O75071 495 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 MYL1P05976 194 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 EFNA5P52803 228 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 CUL4BQ13620 913 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 IKBKEQ14164 716 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 AMHR2Q16671 573 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 RASIP1Q5U651 963 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 CCDC65Q8IXS2 484 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 TIGD1Q96MW7 591 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 LMBRD1Q9NUN5 540 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 PANK4Q9NVE7 773 aa23.91■■□□□ 1.42
SNX1-206ENST00000559389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.9■■□□□ 1.42
SNX1-206ENST00000559389 GOLGA6L22H0YM25 854 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 GTPBP6O43824 516 aaPredicted RBP23.9■■□□□ 1.42
SNX1-206ENST00000559389 TRAK2O60296 914 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 TSPAN1O60635 241 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 ERLIN2O94905 339 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 PRR29P0C7W0 189 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 SMTNP53814 917 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 COASYQ13057 564 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 DSC3Q14574 896 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 SHHQ15465 462 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 FAM187BQ17R55 369 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 UNC13DQ70J99 1090 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 FAM178BQ8IXR5 827 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 TMEM161BQ8NDZ6 487 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 CCDC34Q96HJ3 373 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 MTIF3Q9H2K0 278 aaKnown RBP23.9■■□□□ 1.42
SNX1-206ENST00000559389 FZD8Q9H461 694 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 OLFML3Q9NRN5 406 aa23.9■■□□□ 1.42
SNX1-206ENST00000559389 PRMT7Q9NVM4 692 aaPredicted RBP23.9■■□□□ 1.42
SNX1-206ENST00000559389 CNTNAP2Q9UHC6 1331 aa23.89■■□□□ 1.42
SNX1-206ENST00000559389 PTPRSQ13332 1948 aa23.89■■□□□ 1.42
SNX1-206ENST00000559389 H0YCG3 227 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 K7ENM7 598 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 MGEA5O60502 916 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 KINO60870 393 aaKnown RBP23.89■■□□□ 1.41
SNX1-206ENST00000559389 PRKCBP05771 671 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 WDR5P61964 334 aaKnown RBP23.89■■□□□ 1.41
SNX1-206ENST00000559389 MAPK6Q16659 721 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 KANK3Q6NY19 840 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 TAS1R3Q7RTX0 852 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 RNPC3Q96LT9 517 aaKnown RBP23.89■■□□□ 1.41
SNX1-206ENST00000559389 PRIMPOLQ96LW4 560 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 TMEM134Q9H6X4 195 aa23.89■■□□□ 1.41
SNX1-206ENST00000559389 CXXC1Q9P0U4 656 aaPredicted RBP23.89■■□□□ 1.41
SNX1-206ENST00000559389 PIN4Q9Y237 131 aaKnown RBP23.89■■□□□ 1.41
SNX1-206ENST00000559389 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.88■■□□□ 1.41
SNX1-206ENST00000559389 MAPTP10636 758 aaKnown RBP23.88■■□□□ 1.41
SNX1-206ENST00000559389 SCP2P22307 547 aa23.88■■□□□ 1.41
SNX1-206ENST00000559389 EHHADHQ08426 723 aa23.88■■□□□ 1.41
SNX1-206ENST00000559389 POSTNQ15063 836 aa23.88■■□□□ 1.41
SNX1-206ENST00000559389 HAUS6Q7Z4H7 955 aa23.88■■□□□ 1.41
SNX1-206ENST00000559389 TSPYL2Q9H2G4 693 aaPredicted RBP23.88■■□□□ 1.41
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