RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 GRK2P25098 689 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 TECP42680 631 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 ETF1P62495 437 aaKnown RBP7.18□□□□□ -1.26
VPS29-210ENST00000552130 MEA1Q16626 185 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 GAB4Q2WGN9 574 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 CFAP58Q5T655 872 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 PGBD2Q6P3X8 592 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 ABHD17CQ6PCB6 329 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 RFX8Q6ZV50 586 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 RTL10Q7L3V2 364 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 DAAM2Q86T65 1068 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 TTC30AQ86WT1 665 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 TMTC1Q8IUR5 882 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 KIAA0319LQ8IZA0 1049 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 CHTF18Q8WVB6 975 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 SLC5A5Q92911 643 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 SMARCC1Q92922 1105 aaPredicted RBP7.18□□□□□ -1.26
VPS29-210ENST00000552130 TREX2Q9BQ50 279 aaPredicted RBP7.18□□□□□ -1.26
VPS29-210ENST00000552130 SDF4Q9BRK5 362 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 TMEM120AQ9BXJ8 343 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 ABCG4Q9H172 646 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 WASH6PQ9NQA3 447 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 GGA3Q9NZ52 723 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 CEP72Q9P209 647 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 STAP2Q9UGK3 403 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 CORINQ9Y5Q5 1042 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 GPRASP1Q5JY77 1395 aa7.18□□□□□ -1.26
VPS29-210ENST00000552130 A6NLC8 198 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 WASH4PA8MWX3 477 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 B4DLN1 442 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 CPLX1O14810 134 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 P4HA2O15460 535 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 NCK2O43639 380 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 DNAJA2O60884 412 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 AKR1B1P15121 316 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 MUTP22033 750 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 CYP7A1P22680 504 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 POLR2BP30876 1174 aaKnown RBP7.17□□□□□ -1.26
VPS29-210ENST00000552130 CDK8P49336 464 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 KPNA1P52294 538 aaPredicted RBP7.17□□□□□ -1.26
VPS29-210ENST00000552130 HK2P52789 917 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 MAPK10P53779 464 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 ARL4CP56559 192 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 SCAND1P57086 179 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 SLC14A2Q15849 920 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 DDB1Q16531 1140 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 RNF220Q5VTB9 566 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 NUGGCQ68CJ6 796 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 DENND1CQ8IV53 801 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 MIER2Q8N344 545 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 CAMKK1Q8N5S9 505 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 CENPTQ96BT3 561 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 RADILQ96JH8 1075 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 Q96M66 194 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 ASB2Q96Q27 587 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 HAUS7Q99871 368 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 MCOLN1Q9GZU1 580 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 RNF32Q9H0A6 362 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 DUSP15Q9H1R2 295 aaPredicted RBP7.17□□□□□ -1.26
VPS29-210ENST00000552130 PARD6AQ9NPB6 346 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 IRAK4Q9NWZ3 460 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 ZNF112Q9UJU3 913 aa7.17□□□□□ -1.26
VPS29-210ENST00000552130 PA2G4Q9UQ80 394 aaKnown RBP7.17□□□□□ -1.26
VPS29-210ENST00000552130 H3BML4 177 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 MASP2O00187 686 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 GFRA2O00451 464 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 ADAMTS3O15072 1205 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 KPNA5O15131 536 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 ZBED4O75132 1171 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 POU2F2P09086 479 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 ATP1A3P13637 1013 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 KCNA6P17658 529 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 CNTFP26441 200 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 NPTX2P47972 431 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 CASP5P51878 434 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 PMS1P54277 932 aaKnown RBP7.16□□□□□ -1.26
VPS29-210ENST00000552130 CACNB3P54284 484 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 DCAF7P61962 342 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 MTA1Q13330 715 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 PRKG1Q13976 671 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 SPARCL1Q14515 664 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 PPP2R5DQ14738 602 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 PTPN14Q15678 1187 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 NTRK3Q16288 839 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 CLEC16AQ2KHT3 1053 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 WIPI1Q5MNZ9 446 aaPredicted RBP7.16□□□□□ -1.26
VPS29-210ENST00000552130 FAM205BPQ63HN1 556 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 RASGRP2Q7LDG7 609 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 PPFIBP1Q86W92 1011 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 HEATR4Q86WZ0 1026 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 IRF2BP1Q8IU81 584 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 MSANTD4Q8NCY6 345 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 OR8H1Q8NGG4 311 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 BAHD1Q8TBE0 780 aaPredicted RBP7.16□□□□□ -1.26
VPS29-210ENST00000552130 TMEM169Q96HH4 297 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 MPHOSPH8Q99549 860 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 BAG1Q99933 345 aaPredicted RBP7.16□□□□□ -1.26
VPS29-210ENST00000552130 STK31Q9BXU1 1019 aa7.16□□□□□ -1.26
VPS29-210ENST00000552130 B3GNT5Q9BYG0 378 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms