RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 CLCN4P51793 760 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 RCAN1P53805 252 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 FGD1P98174 961 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 LONRF3Q496Y0 759 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 CYP26C1Q6V0L0 522 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 DHX32Q7L7V1 743 aaKnown RBP12.47□□□□□ -0.41
PFDN5-212ENST00000550880 ZNF410Q86VK4 478 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
PFDN5-212ENST00000550880 LPPQ93052 612 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 NXPE3Q969Y0 559 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 RIT2Q99578 217 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 ZMYND12Q9H0C1 365 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 FAM105AQ9NUU6 356 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 KANSL3Q9P2N6 904 aa12.47□□□□□ -0.41
PFDN5-212ENST00000550880 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
PFDN5-212ENST00000550880 A0A087WZ62 844 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CHMP2AO43633 222 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 ZNF862O60290 1169 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 ZNF623O75123 536 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 OFD1O75665 1012 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 ADH1AP07327 375 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CFHP08603 1231 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CNPP09543 421 aaKnown RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CIITAP33076 1130 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 SLC11A1P49279 550 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 AKAP17AQ02040 695 aaKnown RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 MTERF2Q49AM1 385 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CATSPER4Q7RTX7 472 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 RDM1Q8NG50 284 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 JPH2Q9BR39 696 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 FDXACB1Q9BRP7 624 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 TEKT3Q9BXF9 490 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 FAN1Q9Y2M0 1017 aa12.46□□□□□ -0.41
PFDN5-212ENST00000550880 MYH9P35579 1960 aaKnown RBP12.46□□□□□ -0.41
PFDN5-212ENST00000550880 CCDC195A0A1B0GUA6 201 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 URODP06132 367 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 AK2P54819 239 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 PUM1Q14671 1186 aaKnown RBP eCLIP12.45□□□□□ -0.423e-9■■□□□ 12.2
PFDN5-212ENST00000550880 XKR3Q5GH77 459 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 LRCH2Q5VUJ6 765 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 MIER3Q7Z3K6 550 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 KIAA2013Q8IYS2 634 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 BCL7CQ8WUZ0 217 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-212ENST00000550880 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 NIFKQ9BYG3 293 aaKnown RBP12.45□□□□□ -0.42
PFDN5-212ENST00000550880 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
PFDN5-212ENST00000550880 MAN1C1Q9NR34 630 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 DNAJB4Q9UDY4 337 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 PCDHB2Q9Y5E7 798 aa12.45□□□□□ -0.42
PFDN5-212ENST00000550880 CNTNAP2Q9UHC6 1331 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 C2CD2LO14523 706 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 MSH4O15457 936 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 NARSO43776 548 aaKnown RBP12.44□□□□□ -0.42
PFDN5-212ENST00000550880 NR1I2O75469 434 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 GLUD1P00367 558 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
PFDN5-212ENST00000550880 SRFP11831 508 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 CDC27P30260 824 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 USP11P51784 963 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 EXOSC10Q01780 885 aaKnown RBP12.44□□□□□ -0.42
PFDN5-212ENST00000550880 KRT32Q14532 448 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 TARBP2Q15633 366 aaKnown RBP12.44□□□□□ -0.42
PFDN5-212ENST00000550880 ZNF280BQ86YH2 543 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 CCDC148Q8NFR7 591 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 RMDN1Q96DB5 314 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 TCEANC2Q96MN5 208 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 RHOBTB2Q9BYZ6 727 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 PIDD1Q9HB75 910 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 UBN1Q9NPG3 1134 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 EPS15L1Q9UBC2 864 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 CA14Q9ULX7 337 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 SIT1Q9Y3P8 196 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 R4GN57 208 aa12.44□□□□□ -0.42
PFDN5-212ENST00000550880 CLUHO75153 1309 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 NRP1O14786 923 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 INPPL1O15357 1258 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 LILRB3O75022 631 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 SOD2P04179 222 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
PFDN5-212ENST00000550880 DRP2Q13474 957 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 UGCGQ16739 394 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 SPECC1Q5M775 1068 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 PHLDB3Q6NSJ2 640 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 EXOC8Q8IYI6 725 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 SLC44A3Q8N4M1 653 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 HDAC7Q8WUI4 952 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
PFDN5-212ENST00000550880 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-212ENST00000550880 SMG7Q92540 1137 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms