RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 MAN2B2Q9Y2E5 1009 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 RWDD3Q9Y3V2 267 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 HEMK1Q9Y5R4 338 aaPredicted RBP2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 SNX11Q9Y5W9 270 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 ACTL7BQ9Y614 415 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 HIVEP3Q5T1R4 2406 aa2.8□□□□□ -1.96
TRAV1-1-201ENST00000542354 A0A1B0GUL6 1792 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 OTOGQ6ZRI0 2925 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 HIVEP1P15822 2718 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CCDC168Q8NDH2 2452 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ROBO3Q96MS0 1386 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ICE1Q9Y2F5 2266 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 SDK1Q7Z5N4 2213 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MYADML2A6NDP7 307 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 C4orf47A7E2U8 309 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 NFIBO00712 420 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ATG7O95352 703 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PARNO95453 639 aaKnown RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 GLP2RO95838 553 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CFBP00751 764 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 AFPP02771 609 aaKnown RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MMP1P03956 469 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 AMHP03971 560 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PDGFAP04085 211 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF865P0CJ78 1059 aaPredicted RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CYP2C9P11712 490 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MYF5P13349 255 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 DRD2P14416 443 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 IL1R1P14778 569 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 GLULP15104 373 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CNR2P34972 360 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CTNNB1P35222 781 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 BMPR1AP36894 532 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PCDH1Q08174 1060 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 TCP10Q12799 353 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 BFSP2Q13515 415 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PPP2R5DQ14738 602 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MFSD14BQ5SR56 506 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ERICH6BQ5W0A0 696 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 TSSK4Q6SA08 328 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CXCL17Q6UXB2 119 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF804AQ7Z570 1209 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 VN1R5Q7Z5H4 357 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 TICAM1Q8IUC6 712 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 SRRM1Q8IYB3 904 aaKnown RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MMP21Q8N119 569 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CHCHD4Q8N4Q1 142 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PJA1Q8NG27 643 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ATP8B4Q8TF62 1192 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 TEKT1Q969V4 418 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CLUAP1Q96AJ1 413 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ACSF2Q96CM8 615 aaPredicted RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MAML3Q96JK9 1138 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 CDC5LQ99459 802 aaKnown RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 TINF2Q9BSI4 451 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 MRIQ9BWK5 157 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 TRIM4Q9C037 500 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ANKRD2Q9GZV1 360 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 ACSS3Q9H6R3 686 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 AS3MTQ9HBK9 375 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PPP4R2Q9NY27 417 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 IGSF9Q9P2J2 1179 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 GTF2IRD1Q9UHL9 959 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 COL11A1P12107 1806 aaPredicted RBP2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 NBASA2RRP1 2371 aa2.79□□□□□ -1.96
TRAV1-1-201ENST00000542354 PCNX2A6NKB5 2137 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 MROH7-TTC4A0A0A0MT08 1334 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 C19orf81C9J6K1 198 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZEB2O60315 1214 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 DIAPH2O60879 1101 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 CSPG5O95196 566 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 MAOBP27338 520 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ADMP35318 185 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 TECP42680 631 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 MTHFRP42898 656 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 BACE1P56817 501 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 GJA9P57773 515 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 SIM1P81133 766 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ITIH3Q06033 890 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 PPP2R3AQ06190 1150 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF124Q15973 351 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ZNF423Q2M1K9 1284 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 HEATR6Q6AI08 1181 aaKnown RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 HIST2H2BCQ6DN03 193 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ANKRD54Q6NXT1 300 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 LILRA6Q6PI73 481 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 DCLRE1AQ6PJP8 1040 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 PCSK4Q6UW60 755 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 MPZL3Q6UWV2 235 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 HHIPL2Q6UWX4 724 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 TMEM184AQ6ZMB5 413 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 CCNI2Q6ZMN8 369 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 SPOCD1Q6ZMY3 1216 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ATG14Q6ZNE5 492 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 CCDC84Q86UT8 332 aaPredicted RBP2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 ABRAQ8N0Z2 381 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 FIBCD1Q8N539 461 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 SPATA3Q8NHX4 192 aa2.78□□□□□ -1.96
TRAV1-1-201ENST00000542354 LOXL4Q96JB6 756 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms