RNA–Protein interactions for RNA: ENST00000530939.5

CHID1-217, Transcript of chitinase domain containing 1, humanhuman

TSL 4

Gene CHID1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-217ENST00000530939 PBX3P40426 434 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 RARRES1P49788 294 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 MXD4Q14582 209 aaPredicted RBP29.44■■■□□ 2.3
CHID1-217ENST00000530939 NBR1Q14596 966 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 PUS10Q3MIT2 529 aaKnown RBP29.44■■■□□ 2.3
CHID1-217ENST00000530939 KCNT2Q6UVM3 1135 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 RBM23Q86U06 439 aaKnown RBP29.44■■■□□ 2.3
CHID1-217ENST00000530939 ERMNQ8TAM6 284 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 TRAIPQ9BWF2 469 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 MRPL9Q9BYD2 267 aaKnown RBP29.44■■■□□ 2.3
CHID1-217ENST00000530939 TUFT1Q9NNX1 390 aa29.44■■■□□ 2.3
CHID1-217ENST00000530939 LINC01565O15544 149 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 MED24O75448 989 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 SPATA31C1P0DKV0 1188 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 LTBRP36941 435 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 NRIP1P48552 1158 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 TRAPPC10P48553 1259 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 RAB27AP51159 221 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 TFDP1Q14186 410 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 CLUL1Q15846 466 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 CTC1Q2NKJ3 1217 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 CATSPER3Q86XQ3 398 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 TMX3Q96JJ7 454 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 KIF3AQ9Y496 699 aa29.43■■■□□ 2.3
CHID1-217ENST00000530939 GRXCR2A6NFK2 248 aa29.42■■■□□ 2.3
CHID1-217ENST00000530939 USO1O60763 962 aaKnown RBP29.42■■■□□ 2.3
CHID1-217ENST00000530939 ERLIN2O94905 339 aa29.42■■■□□ 2.3
CHID1-217ENST00000530939 DLX2Q07687 328 aaPredicted RBP29.42■■■□□ 2.3
CHID1-217ENST00000530939 ASAP3Q8TDY4 903 aa29.42■■■□□ 2.3
CHID1-217ENST00000530939 PUF60Q9UHX1 559 aaKnown RBP29.42■■■□□ 2.3
CHID1-217ENST00000530939 INPP5FQ9Y2H2 1132 aa29.42■■■□□ 2.3
CHID1-217ENST00000530939 CD2BP2O95400 341 aaKnown RBP29.41■■■□□ 2.3
CHID1-217ENST00000530939 XRCC6P12956 609 aaKnown RBP eCLIP29.41■■■□□ 2.3
CHID1-217ENST00000530939 U2AF2P26368 475 aaKnown RBP eCLIP29.41■■■□□ 2.3
CHID1-217ENST00000530939 PPM1AP35813 382 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 NDUFV1P49821 464 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 ERVFC1P60507 584 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 GLB1LQ6UWU2 654 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 MAEAQ7L5Y9 396 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 MRPS27Q92552 414 aaKnown RBP29.41■■■□□ 2.3
CHID1-217ENST00000530939 PGBD4Q96DM1 585 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 POLR3FQ9H1D9 316 aaPredicted RBP29.41■■■□□ 2.3
CHID1-217ENST00000530939 TLE6Q9H808 572 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 PCDHB2Q9Y5E7 798 aa29.41■■■□□ 2.3
CHID1-217ENST00000530939 MEIS3P2A8K0S8 358 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 INO80B-WBP1J3KQ70 363 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 PLCB3Q01970 1234 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 ADAM15Q13444 863 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 MCTP1Q6DN14 999 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 POTEGQ6S5H5 508 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 NACC1Q96RE7 527 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 POLR3CQ9BUI4 534 aaPredicted RBP29.4■■■□□ 2.3
CHID1-217ENST00000530939 SPG21Q9NZD8 308 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 FAM50BQ9Y247 325 aa29.4■■■□□ 2.3
CHID1-217ENST00000530939 ZNF623O75123 536 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 TBX10O75333 385 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 ARL2P36404 184 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 PTENP60484 403 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 KRT17Q04695 432 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 CAPSQ13938 189 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 PLPP4Q5VZY2 271 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 ENTPD7Q9NQZ7 604 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 LZTS1Q9Y250 596 aa29.39■■■□□ 2.3
CHID1-217ENST00000530939 PER2O15055 1255 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 GLRA2P23416 452 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 HOXA11P31270 313 aaPredicted RBP29.38■■■□□ 2.29
CHID1-217ENST00000530939 ALDH7A1P49419 539 aaKnown RBP29.38■■■□□ 2.29
CHID1-217ENST00000530939 BCAR1P56945 870 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 NOMO2Q5JPE7 1267 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 PDE12Q6L8Q7 609 aaKnown RBP29.38■■■□□ 2.29
CHID1-217ENST00000530939 FAM178BQ8IXR5 827 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 EFHBQ8N7U6 833 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 TBC1D32Q96NH3 1257 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 TCF25Q9BQ70 676 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 DBR1Q9UK59 544 aaKnown RBP29.38■■■□□ 2.29
CHID1-217ENST00000530939 PCDHB6Q9Y5E3 794 aa29.38■■■□□ 2.29
CHID1-217ENST00000530939 NT5C1B-RDH14C9J2C7 533 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 TSPAN1O60635 241 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 ZC3H11AO75152 810 aaKnown RBP eCLIP29.37■■■□□ 2.29
CHID1-217ENST00000530939 OFD1O75665 1012 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 RPA1P27694 616 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 GJB2P29033 226 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 MCM2P49736 904 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 TOB1P50616 345 aaPredicted RBP29.37■■■□□ 2.29
CHID1-217ENST00000530939 RNASELQ05823 741 aaKnown RBP29.37■■■□□ 2.29
CHID1-217ENST00000530939 NCBP1Q09161 790 aaKnown RBP29.37■■■□□ 2.29
CHID1-217ENST00000530939 UBXN11Q5T124 520 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 HAUS3Q68CZ6 603 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 SLC39A11Q8N1S5 342 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 C4orf32Q8N8J7 132 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 RSPH1Q8WYR4 309 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 CPB2Q96IY4 423 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 GPRC5CQ9NQ84 441 aa29.37■■■□□ 2.29
CHID1-217ENST00000530939 FSCN2O14926 492 aa29.36■■■□□ 2.29
CHID1-217ENST00000530939 SSTR3P32745 418 aaPredicted RBP29.36■■■□□ 2.29
CHID1-217ENST00000530939 CCT6AP40227 531 aaKnown RBP29.36■■■□□ 2.29
CHID1-217ENST00000530939 FXR2P51116 673 aaKnown RBP eCLIP29.36■■■□□ 2.29
CHID1-217ENST00000530939 PTGDRQ13258 359 aa29.36■■■□□ 2.29
CHID1-217ENST00000530939 PCBP1Q15365 356 aaKnown RBP eCLIP29.36■■■□□ 2.29
CHID1-217ENST00000530939 URGCPQ8TCY9 931 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms