RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 HMGN5P82970 282 aaKnown RBP10.54□□□□□ -0.72
SF3B2-204ENST00000525207 PLCB3Q01970 1234 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 GUCY1B3Q02153 619 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 LAMTOR4Q0VGL1 99 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
SF3B2-204ENST00000525207 CLUL1Q15846 466 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 OTUD6AQ7L8S5 288 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 SRGAP1Q7Z6B7 1085 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 FERMT3Q86UX7 667 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 ADHFE1Q8IWW8 467 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 GJD3Q8N144 294 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 SLC39A11Q8N1S5 342 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 RNF149Q8NC42 400 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 SMRP1Q8NCR6 262 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 C8orf76Q96K31 380 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 CDCA3Q99618 268 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-204ENST00000525207 HSD17B14Q9BPX1 270 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 TMEM60Q9H2L4 133 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 IGFLR1Q9H665 355 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 EPHX3Q9H6B9 360 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 MINDY3Q9H8M7 445 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 SH2B1Q9NRF2 756 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-204ENST00000525207 CD207Q9UJ71 328 aa10.54□□□□□ -0.72
SF3B2-204ENST00000525207 MEIS3P2A8K0S8 358 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 ZNF623O75123 536 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 SLITRK3O94933 977 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 EYA4O95677 639 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 SKIP12755 728 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 SSTR3P32745 418 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 MCM7P33993 719 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 TXKP42681 527 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 RARRES1P49788 294 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 ERVFC1P60507 584 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 ORC2Q13416 577 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 DUSP6Q16828 381 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 PLPP4Q5VZY2 271 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 PDE12Q6L8Q7 609 aaKnown RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 GLB1LQ6UWU2 654 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 RBM23Q86U06 439 aaKnown RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 TPH2Q8IWU9 490 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 VN1R2Q8NFZ6 395 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 PRPF31Q8WWY3 499 aaKnown RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 LPPQ93052 612 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 CCDC43Q96MW1 224 aaKnown RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 TCF25Q9BQ70 676 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 FOXP1Q9H334 677 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 C11orf16Q9NQ32 467 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 ENTPD7Q9NQZ7 604 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 ANKEF1Q9NU02 776 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 CLEC1BQ9P126 229 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 BARX2Q9UMQ3 279 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-204ENST00000525207 C5orf42Q9H799 3197 aa10.53□□□□□ -0.72
SF3B2-204ENST00000525207 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 PI4K2BG5E9Z4 385 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 ASAP2O43150 1006 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 DGAT1O75907 488 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 ERLIN2O94905 339 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 OR52Z1P0C646 297 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 COL9A1P20849 921 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 RBM25P49756 843 aaKnown RBP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 BCAR1P56945 870 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 COASYQ13057 564 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 CAPSQ13938 189 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 KCNC3Q14003 757 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 MXD4Q14582 209 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 PCBP1Q15365 356 aaKnown RBP eCLIP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 TMEM173Q86WV6 379 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 FBXO18Q8NFZ0 1043 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 ASAP3Q8TDY4 903 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 MICAL1Q8TDZ2 1067 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 TLE6Q9H808 572 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 SPG21Q9NZD8 308 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 PUF60Q9UHX1 559 aaKnown RBP10.52□□□□□ -0.73
SF3B2-204ENST00000525207 INPP5FQ9Y2H2 1132 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 PCDHB2Q9Y5E7 798 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 DENND4AQ7Z401 1863 aa10.52□□□□□ -0.73
SF3B2-204ENST00000525207 CARNS1A5YM72 827 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 HIDE1A8MVS5 230 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 PER2O15055 1255 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 B4GALT3O60512 393 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 TSPAN1O60635 241 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 USO1O60763 962 aaKnown RBP10.51□□□□□ -0.73
SF3B2-204ENST00000525207 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 ATP2B1P20020 1258 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 HOXA11P31270 313 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-204ENST00000525207 PTENP60484 403 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 RBM10P98175 930 aaKnown RBP10.51□□□□□ -0.73
SF3B2-204ENST00000525207 KRT17Q04695 432 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 POU5F1BQ06416 359 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 TFDP1Q14186 410 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
SF3B2-204ENST00000525207 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms