RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NOMO2Q5JPE7 1267 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 ZBTB41Q5SVQ8 909 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 PDXDC2PQ6P474 469 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 ELMSAN1Q6PJG2 1045 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 PARM1Q6UWI2 310 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 LINC01465Q8N7H1 131 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 LPPQ93052 612 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 PSTPIP2Q9H939 334 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 DPP7Q9UHL4 492 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 ZMIZ1Q9ULJ6 1067 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 RALGAPA1Q6GYQ0 2036 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 SOBPA7XYQ1 873 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 TEX28O15482 410 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 GLUD1P00367 558 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 ADH1AP07327 375 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 DARSP14868 501 aaKnown RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 FGFR4P22455 802 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 TARSP26639 723 aaKnown RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 PHKA2P46019 1235 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 RPS9P46781 194 aaKnown RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 CSRP2Q16527 193 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 GLB1LQ6UWU2 654 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 CELF5Q8N6W0 485 aaKnown RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 RRP36Q96EU6 259 aaKnown RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 ZNF668Q96K58 619 aaPredicted RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 RPS6KC1Q96S38 1066 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 MYL10Q9BUA6 226 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 SPZ1Q9BXG8 430 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 NT5C3AQ9H0P0 336 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 GBP3Q9H0R5 595 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 PIDD1Q9HB75 910 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 ZNF302Q9NR11 478 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 INPP5FQ9Y2H2 1132 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 ZFP37Q9Y6Q3 630 aaPredicted RBP15.77■□□□□ 0.12
NKX3-1-202ENST00000523261 DOCK6Q96HP0 2047 aa15.77■□□□□ 0.11
NKX3-1-202ENST00000523261 SPDYE3A6NKU9 549 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 MEIS3P2A8K0S8 358 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 C2CD2LO14523 706 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 AK2P54819 239 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 RNASELQ05823 741 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 LONRF3Q496Y0 759 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 ZNF280BQ86YH2 543 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 HDAC7Q8WUI4 952 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 PHKBQ93100 1093 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 MAP7D2Q96T17 732 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 TRAIPQ9BWF2 469 aa15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 AGO4Q9HCK5 861 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-202ENST00000523261 GCN1Q92616 2671 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 MTCL1Q9Y4B5 1905 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 TM4SF5O14894 197 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 OFD1O75665 1012 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 SOD2P04179 222 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 URODP06132 367 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 SPATA31D3P0C874 917 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 GPC3P51654 580 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 MTAPQ13126 283 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 FZD5Q13467 585 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 IL31Q6EBC2 164 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 SWSAP1Q6NVH7 229 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 SPATA31D4Q6ZUB0 917 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 ZNF710Q8N1W2 664 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 NELL2Q99435 816 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 DSCC1Q9BVC3 393 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 ZDHHC7Q9NXF8 308 aa15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 FLNBO75369 2602 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-202ENST00000523261 C1QTNF9BB2RNN3 333 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 DDX39AO00148 427 aaKnown RBP15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 NCAM2O15394 837 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 MAGEB2O15479 319 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 DDHD2O94830 711 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 C1QTNF9P0C862 333 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 SDSP20132 328 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 NRLP54845 237 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 PFKPQ01813 784 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 EFCAB12Q6NXP0 572 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 UNQ6494/PRO21346Q6UXR6 183 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 PRR23BQ6ZRT6 265 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 TAS1R1Q7RTX1 841 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 LRRC71Q8N4P6 559 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 KDF1Q8NAX2 398 aaPredicted RBP15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 HERC2P3Q9BVR0 1158 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 PRKD2Q9BZL6 878 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 PLEKHA4Q9H4M7 779 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 RXFP1Q9HBX9 757 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 CHST12Q9NRB3 414 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 FAM217BQ9NTX9 383 aaPredicted RBP15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 SSX2IPQ9Y2D8 614 aa15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 MYH9P35579 1960 aaKnown RBP15.74■□□□□ 0.11
NKX3-1-202ENST00000523261 IFIT3O14879 490 aaKnown RBP15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 CSDE1O75534 798 aaKnown RBP15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 FSHRP23945 695 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 KIF5BP33176 963 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 CEP55Q53EZ4 464 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 TPRG1Q6ZUI0 275 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 CKAP2LQ8IYA6 745 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms