RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZNF280BQ86YH2 543 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 SLC44A3Q8N4M1 653 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 CMASQ8NFW8 434 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-236ENST00000498808 NLRP7Q8WX94 980 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 GBP3Q9H0R5 595 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 CHST12Q9NRB3 414 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 ADAMTS3O15072 1205 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 OFD1O75665 1012 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 OATP04181 439 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 SRFP11831 508 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 TWF2Q6IBS0 349 aaKnown RBP17.64■□□□□ 0.41
HDAC6-236ENST00000498808 SUMF1Q8NBK3 374 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 GPR152Q8TDT2 470 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 MYADMQ96S97 322 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 WDR6Q9NNW5 1121 aaKnown RBP17.64■□□□□ 0.41
HDAC6-236ENST00000498808 MAN1C1Q9NR34 630 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 BARHL2Q9NY43 387 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 EPS15L1Q9UBC2 864 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 ACACBO00763 2458 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 CLUHO75153 1309 aa17.64■□□□□ 0.41
HDAC6-236ENST00000498808 POTEMA6NI47 508 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 hCG_1984214I3L0E3 225 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-236ENST00000498808 PRKCEQ02156 737 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 RNASELQ05823 741 aaKnown RBP17.63■□□□□ 0.41
HDAC6-236ENST00000498808 NONOQ15233 471 aaKnown RBP eCLIP17.63■□□□□ 0.41
HDAC6-236ENST00000498808 UGCGQ16739 394 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 RSPO4Q2I0M5 234 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-236ENST00000498808 PHLDB3Q6NSJ2 640 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 POTEGQ6S5H5 508 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 C1orf210Q8IVY1 113 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 ZNF713Q8N859 430 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-236ENST00000498808 FAM105AQ9NUU6 356 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 TCEAL9Q9UHQ7 104 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 SAMM50Q9Y512 469 aa17.63■□□□□ 0.41
HDAC6-236ENST00000498808 V9GY48 417 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-236ENST00000498808 CCDC195A0A1B0GUA6 201 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 DDHD2O94830 711 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 GLULP15104 373 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 APOA5Q6Q788 366 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 MAML2Q8IZL2 1156 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-236ENST00000498808 RHOBTB2Q9BYZ6 727 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 GCOM2Q9BZD3 368 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-236ENST00000498808 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 NRBP2Q9NSY0 501 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
HDAC6-236ENST00000498808 PIN4Q9Y237 131 aaKnown RBP17.62■□□□□ 0.41
HDAC6-236ENST00000498808 SIT1Q9Y3P8 196 aa17.62■□□□□ 0.41
HDAC6-236ENST00000498808 A0A087WZ62 844 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 WDR64B1ANS9 1081 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 SLC27A2O14975 620 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 INPPL1O15357 1258 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 ZNF623O75123 536 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 RFPL2O75678 378 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 MYBP10242 640 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 SKIP12755 728 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 AFF1P51825 1210 aaKnown RBP17.61■□□□□ 0.41
HDAC6-236ENST00000498808 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
HDAC6-236ENST00000498808 STAMQ92783 540 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 NXPE3Q969Y0 559 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 LENG9Q96B70 501 aa17.61■□□□□ 0.41
HDAC6-236ENST00000498808 FDXACB1Q9BRP7 624 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-236ENST00000498808 MRPL17Q9NRX2 175 aaKnown RBP17.61■□□□□ 0.41
HDAC6-236ENST00000498808 C2CD2LO14523 706 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 LRRN2O75325 713 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 SFPQP23246 707 aaKnown RBP eCLIP17.6■□□□□ 0.41
HDAC6-236ENST00000498808 RAB27AP51159 221 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 RTN1Q16799 776 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 PRR16Q569H4 304 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 CYP26C1Q6V0L0 522 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 AGMOQ6ZNB7 445 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 ZNF707Q96C28 371 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-236ENST00000498808 CEP89Q96ST8 783 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 FOXQ1Q9C009 403 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 DISC1Q9NRI5 854 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 STK39Q9UEW8 545 aa17.6■□□□□ 0.41
HDAC6-236ENST00000498808 NRP1O14786 923 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 TEX28O15482 410 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 SOD2P04179 222 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 AK2P54819 239 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 PJA1Q8NG27 643 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 SMG7Q92540 1137 aaKnown RBP17.59■□□□□ 0.41
HDAC6-236ENST00000498808 RPS6KC1Q96S38 1066 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 TMEM175Q9BSA9 504 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 HERC2P3Q9BVR0 1158 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
HDAC6-236ENST00000498808 SLC2A4RGQ9NR83 387 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 MARCH5Q9NX47 278 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 BRPF3Q9ULD4 1205 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 FAN1Q9Y2M0 1017 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 MIA3Q5JRA6 1907 aa17.59■□□□□ 0.41
HDAC6-236ENST00000498808 COL4A3Q01955 1670 aa17.58■□□□□ 0.41
HDAC6-236ENST00000498808 ZFHX4Q86UP3 3567 aa17.58■□□□□ 0.41
HDAC6-236ENST00000498808 IGKV6-21A0A0C4DH24 114 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 TMEM150BA6NC51 233 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 ANHXE9PGG2 379 aa17.58■□□□□ 0.4
HDAC6-236ENST00000498808 KINO60870 393 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms