RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SRGAP2CP0DJJ0 459 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 ATP4AP20648 1035 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PTGS1P23219 599 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 MATR3P43243 847 aaKnown RBP eCLIP7.66□□□□□ -1.18
UBR4-214ENST00000486515 NAMPTP43490 491 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PHKA2P46019 1235 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PEX3P56589 373 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 RTP1P59025 263 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 NLRP12P59046 1061 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 CACNB1Q02641 598 aaPredicted RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 DPYDQ12882 1025 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 COASYQ13057 564 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 BFSP2Q13515 415 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 TARBP2Q15633 366 aaKnown RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 CCDC85BQ15834 202 aaPredicted RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 KMT5BQ4FZB7 885 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 ZNF658Q5TYW1 1059 aaPredicted RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 ISM2Q6H9L7 571 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 HS2ST1Q7LGA3 356 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 SESTD1Q86VW0 696 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 LRRC71Q8N4P6 559 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 ANKRD20A12PQ8NF67 263 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 TRAPPC12Q8WVT3 735 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PRPF31Q8WWY3 499 aaKnown RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 NLRP4Q96MN2 994 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 GCOM2Q9BZD3 368 aaPredicted RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 FAM49AQ9H0Q0 323 aaPredicted RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 TSPY26PQ9H489 355 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 C11orf49Q9H6J7 331 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 DHX33Q9H6R0 707 aaKnown RBP7.66□□□□□ -1.18
UBR4-214ENST00000486515 TMEM206Q9H813 350 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 SLC39A2Q9NP94 309 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 OLFML3Q9NRN5 406 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 TBC1D7Q9P0N9 293 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PRKAG2Q9UGJ0 569 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 GTF2IRD1Q9UHL9 959 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 GINS2Q9Y248 185 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 TELO2Q9Y4R8 837 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 PCDHA2Q9Y5H9 948 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 CFAP47Q6ZTR5 3102 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 KIAA1217Q5T5P2 1943 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 DOCK3Q8IZD9 2030 aa7.66□□□□□ -1.18
UBR4-214ENST00000486515 NPHP3-ACAD11A0A0J9YXS1 232 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 SMTNL1A8MU46 457 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 PI4K2BG5E9Z4 385 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 INO80B-WBP1J3KQ70 363 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 K7ERI5 159 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 CALUO43852 315 aaPredicted RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 C22orf31O95567 290 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 MAPTP10636 758 aaKnown RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 SFPQP23246 707 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBR4-214ENST00000486515 RPL13P26373 211 aaKnown RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 CASP1P29466 404 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 CLCN3P51790 818 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 PTK7Q13308 1070 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 ACAP1Q15027 740 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 SHHQ15465 462 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 MAPK6Q16659 721 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 AAK1Q2M2I8 961 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 CT47A1Q5JQC4 288 aaPredicted RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 KLHL10Q6JEL2 608 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 LRSAM1Q6UWE0 723 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 ZNF410Q86VK4 478 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 SFR1Q86XK3 245 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 MYOCDQ8IZQ8 938 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 RNF149Q8NC42 400 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 GOLGA5Q8TBA6 731 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 CHD6Q8TD26 2715 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 ANP32BQ92688 251 aaKnown RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 KAT2BQ92831 832 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 ERCC4Q92889 916 aaPredicted RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 HVCN1Q96D96 273 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 ACCSQ96QU6 501 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 TCHPQ9BT92 498 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 CXXC1Q9P0U4 656 aaPredicted RBP7.65□□□□□ -1.18
UBR4-214ENST00000486515 MAN1B1Q9UKM7 699 aa7.65□□□□□ -1.18
UBR4-214ENST00000486515 SETXQ7Z333 2677 aaKnown RBP7.64□□□□□ -1.19
UBR4-214ENST00000486515 UBE4BO95155 1302 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 DENND3A2RUS2 1198 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 EIF3DO15371 548 aaKnown RBP eCLIP7.64□□□□□ -1.19
UBR4-214ENST00000486515 SLC16A4O15374 487 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 TREHO43280 583 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 PQBP1O60828 265 aaKnown RBP7.64□□□□□ -1.19
UBR4-214ENST00000486515 CAND2O75155 1236 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 STBD1O95210 358 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 VTNP04004 478 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 THPOP40225 353 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 LIG4P49917 911 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 KCNQ1P51787 676 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 ZNF131P52739 623 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 ATN1P54259 1190 aaPredicted RBP7.64□□□□□ -1.19
UBR4-214ENST00000486515 IRX5P78411 483 aaPredicted RBP7.64□□□□□ -1.19
UBR4-214ENST00000486515 TYRO3Q06418 890 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 LAMTOR4Q0VGL1 99 aa7.64□□□□□ -1.19
UBR4-214ENST00000486515 PCBP1Q15365 356 aaKnown RBP eCLIP7.64□□□□□ -1.194e-20■□□□□ 8.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms