RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 HOXB8P17481 243 aaPredicted RBP21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 NPEPPSP55786 919 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 BCAR1P56945 870 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 RBM10P98175 930 aaKnown RBP21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 ANKRD54Q6NXT1 300 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 OTUD6AQ7L8S5 288 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 KSR1Q8IVT5 923 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 IFT122Q9HBG6 1241 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 AGPAT5Q9NUQ2 364 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 ZNF318Q5VUA4 2279 aa21.79■■□□□ 1.08
R3HDM1-215ENST00000483021 PIEZO1Q92508 2521 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 TECTAO75443 2155 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 YWHABP31946 246 aaKnown RBP21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 TECP42680 631 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 NCAPH2Q6IBW4 605 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 SRGAP1Q7Z6B7 1085 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 TCP11Q8WWU5 503 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 CASP10Q92851 521 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 GTF3C6Q969F1 213 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 PGBD4Q96DM1 585 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 ZSWIM4Q9H7M6 989 aa21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 WRAP73Q9P2S5 460 aaPredicted RBP21.78■■□□□ 1.08
R3HDM1-215ENST00000483021 ZC3H11AO75152 810 aaKnown RBP eCLIP21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 SPIRE1Q08AE8 756 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 NOMO2Q5JPE7 1267 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 LLGL2Q6P1M3 1020 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 MRPL43Q8N983 215 aaKnown RBP21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 EDAQ92838 391 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 LPPQ93052 612 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 KCNH6Q9H252 994 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 WDFY4Q6ZS81 3184 aa21.77■■□□□ 1.08
R3HDM1-215ENST00000483021 C2orf71A6NGG8 1288 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 ASAP2O43150 1006 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 RNASELQ05823 741 aaKnown RBP21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 NR5A1Q13285 461 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 EMC2Q15006 297 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 TPRNQ4KMQ1 711 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 EARS2Q5JPH6 523 aaKnown RBP21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 PRPF31Q8WWY3 499 aaKnown RBP21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 TMEM143Q96AN5 459 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 DYDC2Q96IM9 177 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 RPGRIP1Q96KN7 1286 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 MFSD14AQ96MC6 490 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 S1PR5Q9H228 398 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 TBC1D13Q9NVG8 400 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 RGL1Q9NZL6 768 aa21.76■■□□□ 1.07
R3HDM1-215ENST00000483021 NT5C1B-RDH14C9J2C7 533 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 FDPSP14324 419 aaKnown RBP21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 HOXD11P31277 338 aaPredicted RBP21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 LAMTOR4Q0VGL1 99 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 GIT2Q14161 759 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 PCBP1Q15365 356 aaKnown RBP eCLIP21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 ME3Q16798 604 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 XKR9Q5GH70 373 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 ERICH6BQ5W0A0 696 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 SYCE2Q6PIF2 218 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 HFE2Q6ZVN8 426 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 ZNF579Q8NAF0 562 aaKnown RBP21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 URGCPQ8TCY9 931 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 TNFRSF25Q93038 417 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 MTRQ99707 1265 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 ZBP1Q9H171 429 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 STK39Q9UEW8 545 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 INPP5FQ9Y2H2 1132 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 PCDHB2Q9Y5E7 798 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 HCFC2Q9Y5Z7 792 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 CNTNAP2Q9UHC6 1331 aa21.75■■□□□ 1.07
R3HDM1-215ENST00000483021 FAM205CA6NFA0 338 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 OFD1O75665 1012 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 SRGAP2CP0DJJ0 459 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 CA8P35219 290 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 CYP4A11Q02928 519 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 CTTNQ14247 550 aaKnown RBP21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 LONRF3Q496Y0 759 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 FERMT3Q86UX7 667 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 VPS52Q8N1B4 723 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 NECAB1Q8N987 351 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 IGSF21Q96ID5 467 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 NRDE2Q9H7Z3 1164 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 PCDHA12Q9UN75 941 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 IRAK3Q9Y616 596 aa21.74■■□□□ 1.07
R3HDM1-215ENST00000483021 DTNBO60941 627 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 ITIH3Q06033 890 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 TRIM29Q14134 588 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 MXD4Q14582 209 aaPredicted RBP21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 CALCRLQ16602 461 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 CES5AQ6NT32 575 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 DDX53Q86TM3 631 aaKnown RBP21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 TPH2Q8IWU9 490 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 TMEM87AQ8NBN3 555 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 RNF149Q8NC42 400 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 NSUN7Q8NE18 718 aaKnown RBP21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 NECTIN4Q96NY8 510 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 RSAD1Q9HA92 442 aa21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 BMP2KQ9NSY1 1161 aaPredicted RBP21.73■■□□□ 1.07
R3HDM1-215ENST00000483021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.72■■□□□ 1.07
R3HDM1-215ENST00000483021 MEIS3P2A8K0S8 358 aa21.72■■□□□ 1.07
R3HDM1-215ENST00000483021 CLASP2O75122 1294 aaKnown RBP21.72■■□□□ 1.07
R3HDM1-215ENST00000483021 ERLIN2O94905 339 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms