RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PBX3P40426 434 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 PHKA2P46019 1235 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 KCNQ1P51787 676 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 MRPS5P82675 430 aaKnown RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 CAPSQ13938 189 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 TFDP1Q14186 410 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 PDIA5Q14554 519 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 MXD4Q14582 209 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 ZRSR1Q15695 479 aaKnown RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 RILPL1Q5EBL4 403 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 TCEAL5Q5H9L2 206 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 CLLU1OSQ5K130 101 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 DTHD1Q6ZMT9 781 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 LRRC55Q6ZSA7 311 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 FAM43BQ6ZT52 329 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 EP400NLQ6ZTU2 488 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 ABI1Q8IZP0 508 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 IGSF22Q8N9C0 903 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 SPPL3Q8TCT6 385 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 SNX29Q8TEQ0 813 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 ATXN2LQ8WWM7 1075 aaKnown RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 HLA-CQ95604 372 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 CPB2Q96IY4 423 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 PLVAPQ9BX97 442 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 TMEM117Q9H0C3 514 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 CWH43Q9H720 699 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 FAM105AQ9NUU6 356 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 DBR1Q9UK59 544 aaKnown RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 NLRC5Q86WI3 1866 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 LRRIQ4A6NIV6 560 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 E9PMD0 336 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 LAD1O00515 517 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 HOXA2O43364 376 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 ERLIN2O94905 339 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 EOMESO95936 686 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 HOXA11P31270 313 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-221ENST00000477561 IRS1P35568 1242 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 PTENP60484 403 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 CAMK1Q14012 370 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 UBXN11Q5T124 520 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 KRT79Q5XKE5 535 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 ARID2Q68CP9 1835 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 HAUS3Q68CZ6 603 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
HDAC6-221ENST00000477561 CDR2LQ86X02 465 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-221ENST00000477561 THNSL1Q8IYQ7 743 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 COLGALT1Q8NBJ5 622 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 POF1BQ8WVV4 589 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 P2RX5Q93086 422 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 PLIN2Q99541 437 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 BHMT2Q9H2M3 363 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 NSUN3Q9H649 340 aaKnown RBP9.18□□□□□ -0.94
HDAC6-221ENST00000477561 IGFLR1Q9H665 355 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 AAASQ9NRG9 546 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 AGPAT5Q9NUQ2 364 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 INPP5FQ9Y2H2 1132 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 PCDHB2Q9Y5E7 798 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 PCDHB12Q9Y5F1 795 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 PCDHGC5Q9Y5F6 944 aa9.18□□□□□ -0.94
HDAC6-221ENST00000477561 NT5C1B-RDH14C9J2C7 533 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 B4GALT5O43286 388 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 TSPAN1O60635 241 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 FGF18O76093 207 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 LIG1P18858 919 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 CYP11B2P19099 503 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 KCNA5P22460 613 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 GTF2F1P35269 517 aaKnown RBP eCLIP9.17□□□□□ -0.943e-6■■■■□ 25.9
HDAC6-221ENST00000477561 PRPHP41219 470 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 ATP2C1P98194 919 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-221ENST00000477561 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 TIGD5Q53EQ6 642 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 NAALADL2Q58DX5 795 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 KCNT2Q6UVM3 1135 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 LRRC43Q8N309 656 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 MCPH1Q8NEM0 835 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 MICAL1Q8TDZ2 1067 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 BSNDQ8WZ55 320 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-221ENST00000477561 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 MMTAG2Q9BU76 263 aaKnown RBP9.17□□□□□ -0.94
HDAC6-221ENST00000477561 EIF2AQ9BY44 585 aaKnown RBP9.17□□□□□ -0.94
HDAC6-221ENST00000477561 GBP3Q9H0R5 595 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 UBE2ZQ9H832 354 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-221ENST00000477561 COG5Q9UP83 839 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 USP20Q9Y2K6 914 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 FNDC1Q4ZHG4 1894 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-221ENST00000477561 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
HDAC6-221ENST00000477561 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 H3BQ06 376 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 LINC01565O15544 149 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 STX6O43752 255 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 ZNF623O75123 536 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms