RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 UBA7P41226 1012 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
BRD9-203ENST00000475706 CABP7Q86V35 215 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 LPPQ93052 612 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 CPB2Q96IY4 423 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 TMEM117Q9H0C3 514 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 AGPAT5Q9NUQ2 364 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 FAM105AQ9NUU6 356 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 TCHHQ07283 1943 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
BRD9-203ENST00000475706 EOMESO95936 686 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 SKIP12755 728 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
BRD9-203ENST00000475706 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
BRD9-203ENST00000475706 RAB27AP51159 221 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 POU5F1BQ06416 359 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 HELQQ8TDG4 1101 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
BRD9-203ENST00000475706 CALML4Q96GE6 196 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 PNMA5Q96PV4 448 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 C11orf84Q9BUA3 381 aaPredicted RBP12.84□□□□□ -0.35
BRD9-203ENST00000475706 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 ZSCAN16Q9H4T2 348 aaPredicted RBP12.84□□□□□ -0.35
BRD9-203ENST00000475706 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 RNF19AQ9NV58 838 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 TYW1Q9NV66 732 aaKnown RBP12.84□□□□□ -0.35
BRD9-203ENST00000475706 LMCD1Q9NZU5 365 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 HCSTQ9UBK5 93 aa12.84□□□□□ -0.35
BRD9-203ENST00000475706 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 ATF7P17544 494 aaPredicted RBP12.83□□□□□ -0.36
BRD9-203ENST00000475706 GRIN1Q05586 938 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
BRD9-203ENST00000475706 PPP2R5AQ15172 486 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 PTPROQ16827 1216 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 CLLU1OSQ5K130 101 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
BRD9-203ENST00000475706 IFNLR1Q8IU57 520 aaPredicted RBP12.83□□□□□ -0.36
BRD9-203ENST00000475706 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■■□□□ 11.4
BRD9-203ENST00000475706 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 PGBD4Q96DM1 585 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 AK8Q96MA6 479 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 CASD1Q96PB1 797 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 RUSC1Q9BVN2 902 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
BRD9-203ENST00000475706 INPP5FQ9Y2H2 1132 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 PCDHB2Q9Y5E7 798 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 PCDHB12Q9Y5F1 795 aa12.83□□□□□ -0.36
BRD9-203ENST00000475706 LAMA2P24043 3122 aaKnown RBP12.83□□□□□ -0.36
BRD9-203ENST00000475706 C5orf67F2Z3F1 127 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 GRM6O15303 877 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 TSPAN1O60635 241 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 AXLP30530 894 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 HOXA11P31270 313 aaPredicted RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 RAD51AP2Q09MP3 1159 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 PTPAQ15257 358 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.36
BRD9-203ENST00000475706 FOXD4L6Q3SYB3 417 aaPredicted RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 HYIQ5T013 277 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 RINT1Q6NUQ1 792 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 FOXD4L3Q6VB84 417 aaPredicted RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 CDR2LQ86X02 465 aaPredicted RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 LRRC43Q8N309 656 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 KLHL23Q8NBE8 558 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 ZNF396Q96N95 335 aaPredicted RBP12.82□□□□□ -0.36
BRD9-203ENST00000475706 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 APOL6Q9BWW8 343 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 PLVAPQ9BX97 442 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 C2orf40Q9H1Z8 148 aa12.82□□□□□ -0.36
BRD9-203ENST00000475706 CITO14578 2027 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 CCDC169A6NNP5 214 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 MEIS3P2A8K0S8 358 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 B4GALT5O43286 388 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 ZNF623O75123 536 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 HIP1RO75146 1068 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 ITGB1P05556 798 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 PRKCBP05771 671 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 PLA2G4BP0C869 781 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 ITGA4P13612 1032 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
BRD9-203ENST00000475706 LAG3P18627 525 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 NAMPTP43490 491 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 PEX3P56589 373 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 KARSQ15046 597 aaKnown RBP12.81□□□□□ -0.36
BRD9-203ENST00000475706 STK38Q15208 465 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 TMEM119Q4V9L6 283 aa12.81□□□□□ -0.36
BRD9-203ENST00000475706 UBXN11Q5T124 520 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms