RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 LIN9Q5TKA1 542 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 PPP4R3CPQ6ZMV5 832 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 RSPH3Q86UC2 560 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 FAM83AQ86UY5 434 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 PSPC1Q8WXF1 523 aaKnown RBP11.41□□□□□ -0.58
TOP3B-210ENST00000444502 OPTNQ96CV9 577 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 MS4A14Q96JA4 679 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 GOLPH3Q9H4A6 298 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 ATP6V0A4Q9HBG4 840 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 KCNH7Q9NS40 1196 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 DNAJC12Q9UKB3 198 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 INPP5FQ9Y2H2 1132 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 MARF1Q9Y4F3 1742 aaKnown RBP11.41□□□□□ -0.58
TOP3B-210ENST00000444502 MSH4O15457 936 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 FERP16591 822 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 PPP1R7Q15435 360 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 ZKSCAN8Q15776 578 aaPredicted RBP11.41□□□□□ -0.58
TOP3B-210ENST00000444502 MIEF2Q96C03 454 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 ERGIC2Q96RQ1 377 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 FAM213AQ9BRX8 229 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 TMEM206Q9H813 350 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 TYW1Q9NV66 732 aaKnown RBP11.41□□□□□ -0.58
TOP3B-210ENST00000444502 TTLL3Q9Y4R7 772 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 SLIT2O94813 1529 aa11.41□□□□□ -0.58
TOP3B-210ENST00000444502 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 RNASELQ05823 741 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 SLC35G1Q2M3R5 365 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 SCYL2Q6P3W7 929 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 PNKPQ96T60 521 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 MED10Q9BTT4 135 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 RASAL2Q9UJF2 1139 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 CLDN3O15551 220 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 IRX1P78414 480 aaPredicted RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 MAPK6Q16659 721 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 LMBRD2Q68DH5 695 aaPredicted RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 TMEM139Q8IV31 216 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 SYCE1Q8N0S2 351 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 MCPH1Q8NEM0 835 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 IDI2Q9BXS1 227 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 GPRC5DQ9NZD1 345 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 PCDHB4Q9Y5E5 795 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 BZW2Q9Y6E2 419 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 LRRC10BA6NIK2 292 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 YDJCA8MPS7 323 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 HIP1RO75146 1068 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 EYA4O95677 639 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 HERVK_113P62684 666 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 TWF2Q6IBS0 349 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 GPRC5AQ8NFJ5 357 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 RAET1EQ8TD07 263 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 SELENOSQ9BQE4 189 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 MMTAG2Q9BU76 263 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 EHD4Q9H223 541 aa11.4□□□□□ -0.58
TOP3B-210ENST00000444502 UTP11Q9Y3A2 253 aaKnown RBP11.4□□□□□ -0.58
TOP3B-210ENST00000444502 CYP2C8P10632 490 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 RPA1P27694 616 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 YWHABP31946 246 aaKnown RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 IRF2BP1Q8IU81 584 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 RNF149Q8NC42 400 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 FERMT1Q9BQL6 677 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 NFU1Q9UMS0 254 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 CTSHP09668 335 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 P4HA1P13674 534 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 PDE6CP51160 858 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 ARPP19P56211 112 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 SNCBQ16143 134 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF746Q6NUN9 644 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 GJB7Q6PEY0 223 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 CDR2LQ86X02 465 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 KAT2BQ92831 832 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 PARK7Q99497 189 aaKnown RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 DNAJC7Q99615 494 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 LRRC1Q9BTT6 524 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 RUSC1Q9BVN2 902 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 MAK16Q9BXY0 300 aaKnown RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 POLR3FQ9H1D9 316 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 ASTN2O75129 1339 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 ANO9A1A5B4 782 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 DAPK3O43293 454 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 CETPP11597 493 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 ARHGAP25P42331 645 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 PPM1FP49593 454 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 CASP4P49662 377 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 VPS41P49754 854 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 CCDC105Q8IYK2 499 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 TAB3Q8N5C8 712 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-210ENST00000444502 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 COG1Q8WTW3 980 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 ARHGAP20Q9P2F6 1191 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 CAPN6Q9Y6Q1 641 aa11.39□□□□□ -0.59
TOP3B-210ENST00000444502 SFNP31947 248 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms