RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SASS6Q6UVJ0 657 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 OLFML1Q6UWY5 402 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 RPTNQ6XPR3 784 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 USP51Q70EK9 711 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 RUFY3Q7L099 469 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 RTL10Q7L3V2 364 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 IPCEF1Q8WWN9 437 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 TBC1D5Q92609 795 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 ARHGEF2Q92974 986 aaKnown RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 MRPL9Q9BYD2 267 aaKnown RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 SLKQ9H2G2 1235 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 VCX3BQ9H321 246 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 TMPRSS5Q9H3S3 457 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 CCSER2Q9H7U1 834 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 CNNM2Q9H8M5 875 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 DBNDD1Q9H9R9 158 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 UPF2Q9HAU5 1272 aaKnown RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 CHST7Q9NS84 486 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 C9orf78Q9NZ63 289 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 AIPL1Q9NZN9 384 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 GMIPQ9P107 970 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 ITGB1BP2Q9UKP3 347 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 SSX2IPQ9Y2D8 614 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 WDR37Q9Y2I8 494 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 MRPL11Q9Y3B7 192 aaKnown RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 C2CD2Q9Y426 696 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 PCDHB14Q9Y5E9 798 aa5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 DHX57Q6P158 1386 aaKnown RBP5.29□□□□□ -1.56
HMGB3P9-201ENST00000441799 PRXQ9BXM0 1461 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 A0A1W2PQ45 241 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 A0A1W2PQY0 241 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SNX2O60749 519 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 REC8O95072 547 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 ZNF205O95201 554 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 STAMBPO95630 424 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 CYP1A2P05177 515 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SLC5A1P13866 664 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 PECAM1P16284 738 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 NF2P35240 595 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 ARL4AP40617 200 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 LIMS1P48059 325 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 CCT8P50990 548 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 KIF11P52732 1056 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SLURP1P55000 103 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 HDAC4P56524 1084 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 CAP1Q01518 475 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 PFKPQ01813 784 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 PLP2Q04941 152 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 LRRC74AQ0VAA2 488 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 GNL2Q13823 731 aaKnown RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 RABEP1Q15276 862 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 RCN1Q15293 331 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 ZXDCQ2QGD7 858 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SPATS1Q496A3 300 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 HS1BP3Q53T59 392 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 DACT2Q5SW24 774 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 NAIF1Q69YI7 327 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 OVOS1Q6IE37 1185 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SWSAP1Q6NVH7 229 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 HIBCHQ6NVY1 386 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 FBXL19Q6PCT2 694 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 FAM114A1Q8IWE2 563 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 RPAP2Q8IXW5 612 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 OR8H1Q8NGG4 311 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 ZNF483Q8TF39 744 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 DNAAF4Q8WXU2 420 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SNX21Q969T3 373 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 MIEF2Q96C03 454 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 TBATAQ96M53 351 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 JMJD8Q96S16 334 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 BDH2Q9BUT1 245 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 CCDC113Q9H0I3 377 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 FANCFQ9NPI8 374 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 INCENPQ9NQS7 918 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 KCNQ5Q9NR82 932 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 TUBA8Q9NY65 449 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 UBAP1Q9NZ09 502 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 CFDP1Q9UEE9 299 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 FBXL5Q9UKA1 691 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 TTLL3Q9Y4R7 772 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 EPRSP07814 1512 aaKnown RBP5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 ABCC2Q92887 1545 aa5.28□□□□□ -1.56
HMGB3P9-201ENST00000441799 SOS1Q07889 1333 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 RASA4BC9J798 803 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 KIF2AO00139 706 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 RASA4O43374 803 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 GREM1O60565 184 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 GNAT2P19087 354 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 PTPRGP23470 1445 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 GRK2P25098 689 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 BMP8BP34820 402 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 SKIV2L2P42285 1042 aaKnown RBP5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 MASP1P48740 699 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 MRE11P49959 708 aa5.27□□□□□ -1.57
HMGB3P9-201ENST00000441799 MXI1P50539 228 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms