RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 FAM133BQ5BKY9 247 aaKnown RBP8.76□□□□□ -1.01
VTI1A-202ENST00000432306 HGSNATQ68CP4 663 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 RCSD1Q6JBY9 416 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 RNF19BQ6ZMZ0 732 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 RUFY4Q6ZNE9 571 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 USP50Q70EL3 339 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-202ENST00000432306 IQCA1Q86XH1 822 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 TEX11Q8IYF3 940 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 SYNE4Q8N205 404 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 LCORLQ8N3X6 602 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 SH2D3CQ8N5H7 860 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 PPHLN1Q8NEY8 458 aaKnown RBP8.76□□□□□ -1.01
VTI1A-202ENST00000432306 NUP133Q8WUM0 1156 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 STAMQ92783 540 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 LRRC45Q96CN5 670 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 NOC4LQ9BVI4 516 aaKnown RBP8.76□□□□□ -1.01
VTI1A-202ENST00000432306 TRIM9Q9C026 710 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 GREM2Q9H772 168 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 ZNF408Q9H9D4 720 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 NGRNQ9NPE2 291 aaKnown RBP8.76□□□□□ -1.01
VTI1A-202ENST00000432306 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 SLC4A4Q9Y6R1 1079 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 FLT1P17948 1338 aa8.76□□□□□ -1.01
VTI1A-202ENST00000432306 FAM221BA6H8Z2 402 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 ORC4O43929 436 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 MOCS3O95396 460 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 PLEKHA8P1O95397 391 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FGFR1OPO95684 399 aaKnown RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FAM153BP0C7A2 387 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 MAGEA1P43355 309 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 TNNC1P63316 161 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 SLC7A5Q01650 507 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 EHHADHQ08426 723 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 NCOA4Q13772 614 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 MAN2A1Q16706 1144 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 C11orf91Q3C1V1 193 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FAM153CQ494X1 144 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 VWA3BQ502W6 1294 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FAM83BQ5T0W9 1011 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 MEI1Q5TIA1 1274 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 BLOC1S3Q6QNY0 202 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 CCDC121Q6ZUS5 278 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 NLRP10Q86W26 655 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 LMNTD2Q8IXW0 634 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 CMTR1Q8N1G2 835 aaKnown RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 TTC8Q8TAM2 541 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 SCFD2Q8WU76 684 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 CCDC47Q96A33 483 aaKnown RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 GPRASP2Q96D09 838 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 HOOK2Q96ED9 719 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 MTMR8Q96EF0 704 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FAM89AQ96GI7 184 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FAXDC2Q96IV6 333 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 HHIPL1Q96JK4 782 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 NDST4Q9H3R1 872 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 EBF2Q9HAK2 575 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 MLXIPQ9HAP2 919 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 CD248Q9HCU0 757 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 LUC7LQ9NQ29 371 aaKnown RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 BATF3Q9NR55 127 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 TMEM260Q9NX78 707 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 FAM153AQ9UHL3 310 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 TSR3Q9UJK0 312 aaKnown RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 SALL4Q9UJQ4 1053 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 NFU1Q9UMS0 254 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 GJA3Q9Y6H8 435 aa8.75□□□□□ -1.01
VTI1A-202ENST00000432306 COL1A1P02452 1464 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-202ENST00000432306 PVALEFA0A1B0GWK0 134 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 KLRG2A4D1S0 409 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PABPN1LA6NDY0 278 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 NDUFB5O43674 189 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PRKAB2O43741 272 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PDE8AO60658 829 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 AOC2O75106 756 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 COBLO75128 1261 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ZBTB48P10074 688 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 EIF4A3P38919 411 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ATP1A2P50993 1020 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 LRRC63Q05C16 580 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 BYSLQ13895 437 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 TAF11Q15544 211 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 NAB2Q15742 525 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 SLC4A8Q2Y0W8 1093 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 IFIT1BQ5T764 474 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ANKRD40Q6AI12 368 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 TPTE2Q6XPS3 522 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 DTHD1Q6ZMT9 781 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 PIK3AP1Q6ZUJ8 805 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 RETREG3Q86VR2 466 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 DZIP3Q86Y13 1208 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 SRBD1Q8N5C6 995 aaKnown RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 USP38Q8NB14 1042 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CCHCR1Q8TD31 782 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 ACTRT1Q8TDG2 376 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 SMCR8Q8TEV9 937 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-202ENST00000432306 FRS2Q8WU20 508 aa8.74□□□□□ -1.01
VTI1A-202ENST00000432306 CASKIN2Q8WXE0 1202 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms