RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
PTCH1-208ENST00000430669 RASSF4Q9H2L5 321 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 LRRC4Q9HBW1 653 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
PTCH1-208ENST00000430669 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-208ENST00000430669 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 SLC18A3Q16572 532 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 HAUS6Q7Z4H7 955 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 GPRASP2Q96D09 838 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 LAMB2P55268 1798 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 HOXD10P28358 340 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 DRAP1Q14919 205 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-208ENST00000430669 RFFLQ8WZ73 363 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ANAPC5Q9UJX4 755 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 SLC16A4O15374 487 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 CAP2P40123 477 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 GFPT1Q06210 699 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-208ENST00000430669 HEXIM2Q96MH2 286 aaKnown RBP12.37□□□□□ -0.43
PTCH1-208ENST00000430669 PARD6BQ9BYG5 372 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 PARVAQ9NVD7 372 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 TAF6LQ9Y6J9 622 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 H7C0C1 242 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ASAP2O43150 1006 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ATP5OP48047 213 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 HMGCS2P54868 508 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 IL9RQ01113 521 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 PDXDC1Q6P996 788 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 PSMA2P25787 234 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 GNA15P30679 374 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-208ENST00000430669 MYMKA6NI61 221 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 INHBAP08476 426 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 GABPAQ06546 454 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ASNSD1Q9NWL6 643 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-208ENST00000430669 CXCR5P32302 372 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 NR1H3Q13133 447 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ZNF677Q86XU0 584 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 THEM5Q8N1Q8 247 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 PSMD1Q99460 953 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ADAM22Q9P0K1 906 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 ANAPC7Q9UJX3 599 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 SLIT2O94813 1529 aa12.37□□□□□ -0.43
PTCH1-208ENST00000430669 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 FTCDO95954 541 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 FMO5P49326 533 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 CCDC144BQ3MJ40 725 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 SESTD1Q86VW0 696 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 SIX6OS1Q8N1H7 587 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 SMC1BQ8NDV3 1235 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 PARK7Q99497 189 aaKnown RBP12.36□□□□□ -0.43
PTCH1-208ENST00000430669 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 INTS2Q9H0H0 1204 aaKnown RBP12.36□□□□□ -0.43
PTCH1-208ENST00000430669 KBTBD4Q9NVX7 518 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 NXF1Q9UBU9 619 aaKnown RBP12.36□□□□□ -0.43
PTCH1-208ENST00000430669 HOXC6P09630 235 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 DHX34Q14147 1143 aaKnown RBP12.36□□□□□ -0.43
PTCH1-208ENST00000430669 MAP7Q14244 749 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 GEN1Q17RS7 908 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 MFSD14CQ5VZR4 134 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 GTF2H1P32780 548 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 ARHGEF18Q6ZSZ5 1173 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 SPATA24Q86W54 205 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 GCOM2Q9BZD3 368 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-208ENST00000430669 ATP2C2O75185 946 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 GCLMP48507 274 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■■■■ 26.8
PTCH1-208ENST00000430669 ZSCAN26Q16670 478 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 FAM129AQ9BZQ8 928 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 CDK17Q00537 523 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 TMEM39BQ9GZU3 492 aa12.36□□□□□ -0.43
PTCH1-208ENST00000430669 CHRNA3P32297 505 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 RNASELQ05823 741 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 NME8Q8N427 588 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 DEFB129Q9H1M3 183 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CLCN6P51797 869 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 HSPBP1Q9NZL4 362 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms