RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 BMP2KQ9NSY1 1161 aaPredicted RBP23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 FAM105AQ9NUU6 356 aa23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 DBR1Q9UK59 544 aaKnown RBP23.72■■□□□ 1.39
UBE2D3-201ENST00000321805 FSD2A1L4K1 749 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 FGF18O76093 207 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 DNAJB1P25685 340 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 TECP42680 631 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 FXR2P51116 673 aaKnown RBP eCLIP23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 PLCB3Q01970 1234 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 CATSPER3Q86XQ3 398 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 THNSL1Q8IYQ7 743 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 NACC1Q96RE7 527 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 STK24Q9Y6E0 443 aa23.71■■□□□ 1.39
UBE2D3-201ENST00000321805 LAD1O00515 517 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 AXLP30530 894 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 ARL2P36404 184 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 PTENP60484 403 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 HYAL1Q12794 435 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 LRRC55Q6ZSA7 311 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 MCPH1Q8NEM0 835 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 PIGOQ8TEQ8 1089 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 PGBD4Q96DM1 585 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 CCDC51Q96ER9 411 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 ZNF558Q96NG5 402 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 RAB34Q9BZG1 259 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 MINDY3Q9H8M7 445 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 TLR9Q9NR96 1032 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 CLDND1Q9NY35 253 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 FAM50BQ9Y247 325 aa23.7■■□□□ 1.38
UBE2D3-201ENST00000321805 MED24O75448 989 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 ERLIN2O94905 339 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 KCNT2Q6UVM3 1135 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 C4orf32Q8N8J7 132 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 HELQQ8TDG4 1101 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 HCSTQ9UBK5 93 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 BDP1A6H8Y1 2624 aa23.69■■□□□ 1.38
UBE2D3-201ENST00000321805 CNTNAP2Q9UHC6 1331 aa23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 CD2BP2O95400 341 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 PDIA5Q14554 519 aa23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 GLB1LQ6UWU2 654 aa23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 CNNM3Q8NE01 707 aa23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 MRPS27Q92552 414 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 PUF60Q9UHX1 559 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.68■■□□□ 1.38
UBE2D3-201ENST00000321805 USO1O60763 962 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 HOXA11P31270 313 aaPredicted RBP23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 IRS1P35568 1242 aa23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 PRPHP41219 470 aa23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 TOB1P50616 345 aaPredicted RBP23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 NCBP1Q09161 790 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 CAPSQ13938 189 aa23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 RILPL1Q5EBL4 403 aa23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 PTCRAQ6ISU1 281 aaPredicted RBP23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 MRPL10Q7Z7H8 261 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 PCDHB2Q9Y5E7 798 aa23.67■■□□□ 1.38
UBE2D3-201ENST00000321805 GRXCR2A6NFK2 248 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 GLRA2P23416 452 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 GJB2P29033 226 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 LTBRP36941 435 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 KRT17Q04695 432 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 PTGDRQ13258 359 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 NOTUMQ6P988 496 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 POTEGQ6S5H5 508 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 EFHBQ8N7U6 833 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 IGSF22Q8N9C0 903 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 ASAP3Q8TDY4 903 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 NECAB3Q96P71 396 aaPredicted RBP23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 CDCA3Q99618 268 aaPredicted RBP23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 POLR3FQ9H1D9 316 aaPredicted RBP23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 SPG21Q9NZD8 308 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 LRWD1Q9UFC0 647 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 PCDHB6Q9Y5E3 794 aa23.66■■□□□ 1.38
UBE2D3-201ENST00000321805 H3BQ06 376 aaPredicted RBP23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 INO80B-WBP1J3KQ70 363 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 FSCN2O14926 492 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 TSPAN1O60635 241 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 ALDH7A1P49419 539 aaKnown RBP23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 ADAM15Q13444 863 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 NBR1Q14596 966 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 NOMO2Q5JPE7 1267 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 EP400NLQ6ZTU2 488 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 SLC39A11Q8N1S5 342 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 NGRNQ9NPE2 291 aaKnown RBP23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 SMC3Q9UQE7 1217 aa23.65■■□□□ 1.38
UBE2D3-201ENST00000321805 H3BQV1 296 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 CSPG5O95196 566 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 NCLP19338 710 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 MBTD1Q05BQ5 628 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 UBXN11Q5T124 520 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 MCTP1Q6DN14 999 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 ADGRD2Q7Z7M1 963 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 URGCPQ8TCY9 931 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 MICAL1Q8TDZ2 1067 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 LPPQ93052 612 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 UBN1Q9NPG3 1134 aa23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.37
UBE2D3-201ENST00000321805 ARHGEF35A5YM69 484 aa23.63■■□□□ 1.37
UBE2D3-201ENST00000321805 OFD1O75665 1012 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms