RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 BBS9Q3SYG4 887 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 GBP7Q8N8V2 638 aaPredicted RBP17.6■□□□□ 0.41
SFXN1-201ENST00000321442 ANKFY1Q9P2R3 1169 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 NDUFB10O96000 172 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 HMGCS2P54868 508 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 ARHGAP4P98171 946 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 MAP7D1Q3KQU3 841 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 ECT2Q9H8V3 914 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 RGL1Q9NZL6 768 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 CNOT8Q9UFF9 292 aaKnown RBP17.6■□□□□ 0.41
SFXN1-201ENST00000321442 SUFUQ9UMX1 484 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 SYNGAP1Q96PV0 1343 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 GPR75-ASB3A0A0A6YYF3 556 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 BYSLQ13895 437 aaKnown RBP17.6■□□□□ 0.41
SFXN1-201ENST00000321442 BBOF1Q8ND07 529 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 XPO6Q96QU8 1125 aaKnown RBP17.6■□□□□ 0.41
SFXN1-201ENST00000321442 CYTH2Q99418 400 aa17.6■□□□□ 0.41
SFXN1-201ENST00000321442 EVI5O60447 810 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 NAALADL2Q58DX5 795 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 ACER1Q8TDN7 264 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 RFFLQ8WZ73 363 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 SAAL1Q96ER3 474 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 TRIM4Q9C037 500 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 SAYSD1Q9NPB0 183 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 INHBAP08476 426 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 NMT1P30419 496 aaKnown RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 GPC5P78333 572 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 NAB2Q15742 525 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 MIPOL1Q8TD10 442 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 OTUD5Q96G74 571 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 TGS1Q96RS0 853 aaKnown RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 MPHOSPH6Q99547 160 aaKnown RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 PCDHB4Q9Y5E5 795 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 FAM205AQ6ZU69 1335 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 GOLGA8MH3BSY2 632 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 RNF225M0QZC1 329 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 FAM153BP0C7A2 387 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 FAM153CQ494X1 144 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 TRIM59Q8IWR1 403 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 RPUSD2Q8IZ73 545 aaKnown RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.59■□□□□ 0.41
SFXN1-201ENST00000321442 AS3MTQ9HBK9 375 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 FAM153AQ9UHL3 310 aa17.59■□□□□ 0.41
SFXN1-201ENST00000321442 LRRIQ4A6NIV6 560 aa17.58■□□□□ 0.41
SFXN1-201ENST00000321442 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.41
SFXN1-201ENST00000321442 LONRF1Q17RB8 773 aa17.58■□□□□ 0.41
SFXN1-201ENST00000321442 GJB7Q6PEY0 223 aa17.58■□□□□ 0.41
SFXN1-201ENST00000321442 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.58■□□□□ 0.41
SFXN1-201ENST00000321442 SPAG7O75391 227 aa17.58■□□□□ 0.41
SFXN1-201ENST00000321442 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.41
SFXN1-201ENST00000321442 ANGEL2Q5VTE6 544 aaKnown RBP17.58■□□□□ 0.41
SFXN1-201ENST00000321442 SLC35G2Q8TBE7 412 aa17.58■□□□□ 0.41
SFXN1-201ENST00000321442 STXBP3O00186 592 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 MAPK13O15264 365 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 IRX4P78413 519 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 BASP1P80723 227 aaKnown RBP17.58■□□□□ 0.4
SFXN1-201ENST00000321442 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.4
SFXN1-201ENST00000321442 LTN1O94822 1766 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 DMP1Q13316 513 aaPredicted RBP17.58■□□□□ 0.4
SFXN1-201ENST00000321442 SLC29A2Q14542 456 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 SEC23AQ15436 765 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 TMEM139Q8IV31 216 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 FBXL16Q8N461 479 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 DEPTORQ8TB45 409 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 RNF25Q96BH1 459 aaPredicted RBP17.58■□□□□ 0.4
SFXN1-201ENST00000321442 SGSM3Q96HU1 749 aa17.58■□□□□ 0.4
SFXN1-201ENST00000321442 DDX4Q9NQI0 724 aaKnown RBP17.58■□□□□ 0.4
SFXN1-201ENST00000321442 ENO4A6NNW6 628 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 PDHBP11177 359 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 MARK3P27448 753 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 SERPINB6P35237 376 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 GMPSP49915 693 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-201ENST00000321442 PEX3P56589 373 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 Q3C1V9 767 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 HIPK4Q8NE63 616 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 LRRC37BQ96QE4 947 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
SFXN1-201ENST00000321442 RFX8Q6ZV50 586 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 EPM2AIP1Q7L775 607 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-201ENST00000321442 PASD1Q8IV76 773 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 CFAP57Q96MR6 1250 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 RTFDC1Q9BY42 306 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-201ENST00000321442 FGFR1OP2Q9NVK5 253 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 KBTBD4Q9NVX7 518 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 ESRRAP11474 423 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-201ENST00000321442 CYB5D1Q6P9G0 228 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 C9orf72Q96LT7 481 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 ACCSQ96QU6 501 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 ISCUQ9H1K1 167 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 ZNF70Q9UC06 446 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-201ENST00000321442 ABCB11O95342 1321 aa17.57■□□□□ 0.4
SFXN1-201ENST00000321442 MTMR2Q13614 643 aa17.56■□□□□ 0.4
SFXN1-201ENST00000321442 PLEKHG2Q9H7P9 1386 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms