RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W IRC4Q03036 179 aa2.22□□□□□ -2.05
UBP16YPL072W TDA1Q03533 586 aa2.22□□□□□ -2.05
UBP16YPL072W YDL109CQ12103 647 aa2.22□□□□□ -2.05
UBP16YPL072W ERP3Q12403 225 aa2.22□□□□□ -2.05
UBP16YPL072W PSK1P31374 1356 aa2.22□□□□□ -2.05
UBP16YPL072W HEM4P06174 275 aa2.22□□□□□ -2.05
UBP16YPL072W RPS18AP0CX55 146 aaKnown RBP2.22□□□□□ -2.05
UBP16YPL072W RPS18BP0CX56 146 aaPredicted RBP2.22□□□□□ -2.05
UBP16YPL072W CTA1P15202 515 aa2.22□□□□□ -2.05
UBP16YPL072W GPI12P23797 304 aa2.22□□□□□ -2.05
UBP16YPL072W MRPS9P38120 278 aa2.22□□□□□ -2.05
UBP16YPL072W MMS21P38632 267 aa2.22□□□□□ -2.05
UBP16YPL072W RCY1P39531 840 aa2.22□□□□□ -2.05
UBP16YPL072W LIA1P47120 325 aaKnown RBP2.22□□□□□ -2.05
UBP16YPL072W MST27P53176 234 aa2.22□□□□□ -2.05
UBP16YPL072W YGR266WP53326 701 aa2.22□□□□□ -2.05
UBP16YPL072W YPL080CQ02826 108 aa2.22□□□□□ -2.05
UBP16YPL072W ECM11Q04110 302 aa2.22□□□□□ -2.05
UBP16YPL072W PBP4Q07362 185 aaKnown RBP2.22□□□□□ -2.05
UBP16YPL072W ALE1Q08548 619 aa2.22□□□□□ -2.05
UBP16YPL072W DDC1Q08949 612 aa2.22□□□□□ -2.05
UBP16YPL072W FMP16Q12497 93 aa2.22□□□□□ -2.05
UBP16YPL072W IZH4Q99393 312 aa2.22□□□□□ -2.05
UBP16YPL072W SSK22P25390 1331 aaPredicted RBP2.21□□□□□ -2.06
UBP16YPL072W TDH1P00360 332 aaKnown RBP2.21□□□□□ -2.06
UBP16YPL072W PRB1P09232 635 aa2.21□□□□□ -2.06
UBP16YPL072W VPS1P21576 704 aaKnown RBP2.21□□□□□ -2.06
UBP16YPL072W FUN26P31381 517 aa2.21□□□□□ -2.06
UBP16YPL072W COT1P32798 439 aa2.21□□□□□ -2.06
UBP16YPL072W SKG6P32900 734 aaPredicted RBP2.21□□□□□ -2.06
UBP16YPL072W YKL162CP36052 402 aa2.21□□□□□ -2.06
UBP16YPL072W SWD2P36104 329 aaPredicted RBP2.21□□□□□ -2.06
UBP16YPL072W HIS2P38635 335 aa2.21□□□□□ -2.06
UBP16YPL072W YHR035WP38769 630 aa2.21□□□□□ -2.06
UBP16YPL072W CTM1P38818 585 aa2.21□□□□□ -2.06
UBP16YPL072W LSM12P38828 187 aaKnown RBP2.21□□□□□ -2.06
UBP16YPL072W OXA1P39952 402 aa2.21□□□□□ -2.06
UBP16YPL072W YER186CP40101 306 aa2.21□□□□□ -2.06
UBP16YPL072W NUP84P52891 726 aa2.21□□□□□ -2.06
UBP16YPL072W SEH1P53011 349 aaKnown RBP2.21□□□□□ -2.06
UBP16YPL072W COS1P53822 381 aa2.21□□□□□ -2.06
UBP16YPL072W LIP2Q06005 328 aa2.21□□□□□ -2.06
UBP16YPL072W GAS2Q06135 555 aa2.21□□□□□ -2.06
UBP16YPL072W RRT8Q08219 342 aa2.21□□□□□ -2.06
UBP16YPL072W IES4Q08561 116 aa2.21□□□□□ -2.06
UBP16YPL072W LDB17Q12342 491 aa2.21□□□□□ -2.06
UBP16YPL072W YDL199CQ12407 687 aa2.21□□□□□ -2.06
UBP16YPL072W RPL23AP0CX41 137 aaKnown RBP2.2□□□□□ -2.06
UBP16YPL072W RPL23BP0CX42 137 aaKnown RBP2.2□□□□□ -2.06
UBP16YPL072W YSR3P23501 404 aa2.2□□□□□ -2.06
UBP16YPL072W LDS1P31379 325 aa2.2□□□□□ -2.06
UBP16YPL072W COS9P36034 407 aa2.2□□□□□ -2.06
UBP16YPL072W BAT1P38891 393 aaKnown RBP2.2□□□□□ -2.06
UBP16YPL072W CTK3P46963 296 aaPredicted RBP2.2□□□□□ -2.06
UBP16YPL072W BNS1P50084 137 aa2.2□□□□□ -2.06
UBP16YPL072W LSG1P53145 640 aaKnown RBP2.2□□□□□ -2.06
UBP16YPL072W OKP1P53298 406 aa2.2□□□□□ -2.06
UBP16YPL072W MKC7P53379 596 aa2.2□□□□□ -2.06
UBP16YPL072W MRPS16Q02608 121 aa2.2□□□□□ -2.06
UBP16YPL072W FSH2Q05015 223 aa2.2□□□□□ -2.06
UBP16YPL072W GPN3Q06543 272 aa2.2□□□□□ -2.06
UBP16YPL072W BER1Q06688 274 aaKnown RBP2.2□□□□□ -2.06
UBP16YPL072W YLL007CQ07799 665 aa2.2□□□□□ -2.06
UBP16YPL072W MED4Q12343 284 aa2.2□□□□□ -2.06
UBP16YPL072W ILV1P00927 576 aaKnown RBP2.19□□□□□ -2.06
UBP16YPL072W COX4P04037 155 aa2.19□□□□□ -2.06
UBP16YPL072W RSR1P13856 272 aa2.19□□□□□ -2.06
UBP16YPL072W ERD1P16151 362 aa2.19□□□□□ -2.06
UBP16YPL072W IME2P32581 645 aa2.19□□□□□ -2.06
UBP16YPL072W IES6P32617 166 aa2.19□□□□□ -2.06
UBP16YPL072W KTI12P34253 313 aaKnown RBP2.19□□□□□ -2.06
UBP16YPL072W TPO5P36029 618 aa2.19□□□□□ -2.06
UBP16YPL072W OM14P38325 134 aa2.19□□□□□ -2.06
UBP16YPL072W YIA6P40556 373 aa2.19□□□□□ -2.06
UBP16YPL072W EGT2P42835 1041 aa2.19□□□□□ -2.06
UBP16YPL072W YCH1P42937 148 aa2.19□□□□□ -2.06
UBP16YPL072W MOB2P43563 287 aa2.19□□□□□ -2.06
UBP16YPL072W CIN2P46670 268 aa2.19□□□□□ -2.06
UBP16YPL072W CRH1P53301 507 aa2.19□□□□□ -2.06
UBP16YPL072W SED5Q01590 340 aa2.19□□□□□ -2.06
UBP16YPL072W SPP2Q02521 185 aa2.19□□□□□ -2.06
UBP16YPL072W YET2Q04210 160 aa2.19□□□□□ -2.06
UBP16YPL072W DTD1Q07648 150 aaKnown RBP2.19□□□□□ -2.06
UBP16YPL072W BTS1Q12051 335 aa2.19□□□□□ -2.06
UBP16YPL072W YOL107WQ12239 342 aa2.19□□□□□ -2.06
UBP16YPL072W RRP42Q12277 265 aaPredicted RBP2.19□□□□□ -2.06
UBP16YPL072W PRP46Q12417 451 aaPredicted RBP2.19□□□□□ -2.06
UBP16YPL072W NAG1Q8TGN9 163 aa2.19□□□□□ -2.06
UBP16YPL072W CBP6P07253 162 aaPredicted RBP2.18□□□□□ -2.06
UBP16YPL072W UNG1P12887 359 aa2.18□□□□□ -2.06
UBP16YPL072W MIR1P23641 311 aaKnown RBP2.18□□□□□ -2.06
UBP16YPL072W RPL16BP26785 198 aaKnown RBP2.18□□□□□ -2.06
UBP16YPL072W URA10P30402 227 aa2.18□□□□□ -2.06
UBP16YPL072W YKL071WP36086 256 aa2.18□□□□□ -2.06
UBP16YPL072W DTR1P38125 572 aa2.18□□□□□ -2.06
UBP16YPL072W SMF2P38778 549 aa2.18□□□□□ -2.06
UBP16YPL072W TIM17P39515 158 aa2.18□□□□□ -2.06
UBP16YPL072W AGX1P43567 385 aa2.18□□□□□ -2.06
UBP16YPL072W ATG18P43601 500 aa2.18□□□□□ -2.06
UBP16YPL072W AIM23P47015 356 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms