RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SPP381P38282 291 aaPredicted RBP3.17□□□□□ -1.9
RPA43YOR340C DED81P38707 554 aaKnown RBP3.17□□□□□ -1.9
RPA43YOR340C DSN1P40568 576 aa3.17□□□□□ -1.9
RPA43YOR340C ELP2P42935 788 aa3.17□□□□□ -1.9
RPA43YOR340C GWT1P47026 490 aa3.17□□□□□ -1.9
RPA43YOR340C ATP22P50273 684 aaPredicted RBP3.17□□□□□ -1.9
RPA43YOR340C YIP1P53039 248 aa3.17□□□□□ -1.9
RPA43YOR340C SLT2Q00772 484 aa3.17□□□□□ -1.9
RPA43YOR340C SPP2Q02521 185 aa3.17□□□□□ -1.9
RPA43YOR340C VPS74Q06385 345 aa3.17□□□□□ -1.9
RPA43YOR340C PLB3Q08108 686 aa3.17□□□□□ -1.9
RPA43YOR340C PST1Q12355 444 aa3.17□□□□□ -1.9
RPA43YOR340C SKS1Q12505 502 aa3.17□□□□□ -1.9
RPA43YOR340C CDC21P06785 304 aa3.16□□□□□ -1.9
RPA43YOR340C CPA1P07258 411 aaKnown RBP3.16□□□□□ -1.9
RPA43YOR340C SSC1P0CS90 654 aaKnown RBP3.16□□□□□ -1.9
RPA43YOR340C YAR066WP0CX18 203 aa3.16□□□□□ -1.9
RPA43YOR340C YHR214WP0CX19 203 aa3.16□□□□□ -1.9
RPA43YOR340C CUP1-1P0CX80 61 aa3.16□□□□□ -1.9
RPA43YOR340C CUP1-2P0CX81 61 aa3.16□□□□□ -1.9
RPA43YOR340C GPA2P10823 449 aa3.16□□□□□ -1.9
RPA43YOR340C PRP16P15938 1071 aaPredicted RBP3.16□□□□□ -1.9
RPA43YOR340C CDC23P16522 626 aa3.16□□□□□ -1.9
RPA43YOR340C RIM1P32445 135 aaKnown RBP3.16□□□□□ -1.9
RPA43YOR340C PTM1P32857 523 aa3.16□□□□□ -1.9
RPA43YOR340C TIP20P33891 701 aa3.16□□□□□ -1.9
RPA43YOR340C RSM22P36056 628 aa3.16□□□□□ -1.9
RPA43YOR340C MRPL37P36532 105 aa3.16□□□□□ -1.9
RPA43YOR340C OLA1P38219 394 aaKnown RBP3.16□□□□□ -1.9
RPA43YOR340C WSS1P38838 269 aa3.16□□□□□ -1.9
RPA43YOR340C MLH1P38920 769 aa3.16□□□□□ -1.9
RPA43YOR340C STN1P38960 494 aa3.16□□□□□ -1.9
RPA43YOR340C UTP18P40362 594 aaPredicted RBP3.16□□□□□ -1.9
RPA43YOR340C IKS1P47042 667 aa3.16□□□□□ -1.9
RPA43YOR340C BIO4P53630 237 aa3.16□□□□□ -1.9
RPA43YOR340C GIP3Q03016 1276 aa3.16□□□□□ -1.9
RPA43YOR340C GOT1Q03554 138 aa3.16□□□□□ -1.9
RPA43YOR340C YMR209CQ03648 457 aa3.16□□□□□ -1.9
RPA43YOR340C TAF12Q03761 539 aa3.16□□□□□ -1.9
RPA43YOR340C SFH1Q06168 426 aa3.16□□□□□ -1.9
RPA43YOR340C YPL247CQ12523 523 aa3.16□□□□□ -1.9
RPA43YOR340C YIL046W-AQ3E7Z4 54 aa3.16□□□□□ -1.9
RPA43YOR340C IRA1P18963 3092 aa3.16□□□□□ -1.9
RPA43YOR340C FAS1P07149 2051 aaKnown RBP3.15□□□□□ -1.9
RPA43YOR340C YBR056W-AI2HB52 66 aa3.15□□□□□ -1.91
RPA43YOR340C ILV5P06168 395 aaKnown RBP3.15□□□□□ -1.91
RPA43YOR340C POL30P15873 258 aaKnown RBP3.15□□□□□ -1.91
RPA43YOR340C YCR022CP25620 114 aa3.15□□□□□ -1.91
RPA43YOR340C PTR2P32901 601 aa3.15□□□□□ -1.91
RPA43YOR340C MAK5P38112 773 aaPredicted RBP3.15□□□□□ -1.91
RPA43YOR340C YAL037WP39728 267 aa3.15□□□□□ -1.91
RPA43YOR340C HAT2P39984 401 aa3.15□□□□□ -1.91
RPA43YOR340C PEP8P40335 379 aa3.15□□□□□ -1.91
RPA43YOR340C DIM1P41819 318 aaKnown RBP3.15□□□□□ -1.91
RPA43YOR340C BIR1P47134 954 aa3.15□□□□□ -1.91
RPA43YOR340C YGL260WP53056 76 aa3.15□□□□□ -1.91
RPA43YOR340C BOL2P53082 120 aa3.15□□□□□ -1.91
RPA43YOR340C CRZ1P53968 678 aa3.15□□□□□ -1.91
RPA43YOR340C MEH1Q02205 184 aa3.15□□□□□ -1.91
RPA43YOR340C CSN9Q03981 162 aa3.15□□□□□ -1.91
RPA43YOR340C YMR317WQ04893 1140 aa3.15□□□□□ -1.91
RPA43YOR340C APC9Q12107 265 aa3.15□□□□□ -1.91
RPA43YOR340C GCY1P14065 312 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
RPA43YOR340C DAP2P18962 818 aa3.14□□□□□ -1.91
RPA43YOR340C CTR86P25355 563 aa3.14□□□□□ -1.91
RPA43YOR340C KRR1P25586 316 aaPredicted RBP3.14□□□□□ -1.91
RPA43YOR340C YCR100CP25606 316 aa3.14□□□□□ -1.91
RPA43YOR340C CWP1P28319 239 aa3.14□□□□□ -1.91
RPA43YOR340C MEI5P32489 222 aa3.14□□□□□ -1.91
RPA43YOR340C NIP1P32497 812 aaKnown RBP3.14□□□□□ -1.91
RPA43YOR340C NDC1P32500 655 aa3.14□□□□□ -1.91
RPA43YOR340C MGM101P32787 269 aaKnown RBP3.14□□□□□ -1.91
RPA43YOR340C RPC37P36121 282 aa3.14□□□□□ -1.91
RPA43YOR340C FMP46P36141 133 aaKnown RBP3.14□□□□□ -1.91
RPA43YOR340C DAD2P36162 133 aa3.14□□□□□ -1.91
RPA43YOR340C EFM1P38732 585 aa3.14□□□□□ -1.91
RPA43YOR340C YHR182WP38870 785 aa3.14□□□□□ -1.91
RPA43YOR340C GPI16P38875 610 aa3.14□□□□□ -1.91
RPA43YOR340C YDR089WP38966 869 aa3.14□□□□□ -1.91
RPA43YOR340C GAT2P40209 560 aa3.14□□□□□ -1.91
RPA43YOR340C SEC27P41811 889 aaKnown RBP3.14□□□□□ -1.91
RPA43YOR340C GCD10P41814 478 aa3.14□□□□□ -1.91
RPA43YOR340C YFR018CP43599 363 aa3.14□□□□□ -1.91
RPA43YOR340C HMS2P47175 358 aa3.14□□□□□ -1.91
RPA43YOR340C ROG1P53118 685 aa3.14□□□□□ -1.91
RPA43YOR340C ZRG17P53735 605 aa3.14□□□□□ -1.91
RPA43YOR340C RIF2Q06208 395 aa3.14□□□□□ -1.91
RPA43YOR340C REX4Q08237 289 aa3.14□□□□□ -1.91
RPA43YOR340C RPN8Q08723 338 aaKnown RBP3.14□□□□□ -1.91
RPA43YOR340C YLR053CQ12026 108 aa3.14□□□□□ -1.91
RPA43YOR340C YOR012WQ12351 137 aa3.14□□□□□ -1.91
RPA43YOR340C GTT2Q12390 233 aa3.14□□□□□ -1.91
RPA43YOR340C RGS2Q99188 309 aa3.14□□□□□ -1.91
RPA43YOR340C RPL6BP05739 176 aaKnown RBP3.13□□□□□ -1.91
RPA43YOR340C MRS3P10566 314 aa3.13□□□□□ -1.91
RPA43YOR340C PHO91P27514 894 aa3.13□□□□□ -1.91
RPA43YOR340C CDC13P32797 924 aaKnown RBP3.13□□□□□ -1.91
RPA43YOR340C SKN1P33336 771 aa3.13□□□□□ -1.91
RPA43YOR340C SDH3P33421 198 aa3.13□□□□□ -1.91
RPA43YOR340C MRPL4P36517 319 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms