RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C PET122P10355 254 aa5.42□□□□□ -1.54
SSK1YLR006C MRPL9P31334 269 aa5.42□□□□□ -1.54
SSK1YLR006C PRP18P33411 251 aaPredicted RBP5.42□□□□□ -1.54
SSK1YLR006C SDH3P33421 198 aa5.42□□□□□ -1.54
SSK1YLR006C CLG1P35190 452 aa5.42□□□□□ -1.54
SSK1YLR006C AHP1P38013 176 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C DTR1P38125 572 aa5.42□□□□□ -1.54
SSK1YLR006C TSL1P38427 1098 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C UFE1P41834 346 aa5.42□□□□□ -1.54
SSK1YLR006C YML108WQ03759 105 aa5.42□□□□□ -1.54
SSK1YLR006C GAL83Q04739 417 aa5.42□□□□□ -1.54
SSK1YLR006C PEX10Q05568 337 aa5.42□□□□□ -1.54
SSK1YLR006C YPS7Q06325 596 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-GR1Q12085 440 aa5.42□□□□□ -1.54
SSK1YLR006C YLR126CQ12288 251 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C TY1A-OLQ92392 440 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C PNO1Q99216 274 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C ATP1P07251 545 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C NFT1P0CE68 1218 aa5.42□□□□□ -1.54
SSK1YLR006C YCR101CP25607 182 aa5.42□□□□□ -1.54
SSK1YLR006C CMC1P36064 111 aa5.42□□□□□ -1.54
SSK1YLR006C DCW1P36091 449 aa5.42□□□□□ -1.54
SSK1YLR006C AUR1P36107 401 aaPredicted RBP5.42□□□□□ -1.54
SSK1YLR006C ECM13P38195 257 aa5.42□□□□□ -1.54
SSK1YLR006C IPT1P38954 527 aa5.42□□□□□ -1.54
SSK1YLR006C SOK1P40317 901 aa5.42□□□□□ -1.54
SSK1YLR006C MRPL50P53724 139 aa5.42□□□□□ -1.54
SSK1YLR006C BUD17P53727 317 aa5.42□□□□□ -1.54
SSK1YLR006C IDP3P53982 420 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C SKO1Q02100 647 aa5.42□□□□□ -1.54
SSK1YLR006C MAK3Q03503 176 aa5.42□□□□□ -1.54
SSK1YLR006C HER2Q03557 464 aa5.42□□□□□ -1.54
SSK1YLR006C TRI1Q05024 226 aa5.42□□□□□ -1.54
SSK1YLR006C NEJ1Q06148 342 aa5.42□□□□□ -1.54
SSK1YLR006C THP1Q08231 455 aa5.42□□□□□ -1.54
SSK1YLR006C YGK3Q12222 375 aaPredicted RBP5.42□□□□□ -1.54
SSK1YLR006C TRM10Q12400 293 aa5.42□□□□□ -1.54
SSK1YLR006C NHP6BP11633 99 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C PEX1P24004 1043 aa5.41□□□□□ -1.54
SSK1YLR006C FUB1P25659 250 aa5.41□□□□□ -1.54
SSK1YLR006C ACH1P32316 526 aa5.41□□□□□ -1.54
SSK1YLR006C RAD23P32628 398 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C MRPL6P32904 214 aa5.41□□□□□ -1.54
SSK1YLR006C WBP1P33767 430 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C PFS1P38872 237 aa5.41□□□□□ -1.54
SSK1YLR006C PAN6P40459 309 aa5.41□□□□□ -1.54
SSK1YLR006C DIE2P50076 525 aa5.41□□□□□ -1.54
SSK1YLR006C NUP49Q02199 472 aa5.41□□□□□ -1.54
SSK1YLR006C YOR365CQ08844 703 aa5.41□□□□□ -1.54
SSK1YLR006C SAM4Q08985 325 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C SUT2Q12286 268 aa5.41□□□□□ -1.54
SSK1YLR006C HMS1Q12398 434 aa5.41□□□□□ -1.54
SSK1YLR006C LPX1Q12405 387 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C YDL199CQ12407 687 aa5.41□□□□□ -1.54
SSK1YLR006C DCP1Q12517 231 aaPredicted RBP5.41□□□□□ -1.54
SSK1YLR006C UBR1P19812 1950 aa5.41□□□□□ -1.54
SSK1YLR006C CDC21P06785 304 aa5.41□□□□□ -1.54
SSK1YLR006C SPT3P06844 337 aa5.41□□□□□ -1.54
SSK1YLR006C MAS1P10507 462 aa5.41□□□□□ -1.54
SSK1YLR006C SAC7P17121 654 aa5.41□□□□□ -1.54
SSK1YLR006C PTC6P25646 442 aa5.41□□□□□ -1.54
SSK1YLR006C PPA2P28239 310 aa5.41□□□□□ -1.54
SSK1YLR006C IDH2P28241 369 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C ARO7P32178 256 aa5.41□□□□□ -1.54
SSK1YLR006C SEC17P32602 292 aa5.41□□□□□ -1.54
SSK1YLR006C ARN2P38724 620 aa5.41□□□□□ -1.54
SSK1YLR006C ERG28P40030 148 aa5.41□□□□□ -1.54
SSK1YLR006C GTS1P40956 396 aa5.41□□□□□ -1.54
SSK1YLR006C HNT2P49775 206 aa5.41□□□□□ -1.54
SSK1YLR006C YGL114WP53134 725 aa5.41□□□□□ -1.54
SSK1YLR006C YNL140CP53910 189 aa5.41□□□□□ -1.54
SSK1YLR006C RFU1Q08003 200 aa5.41□□□□□ -1.54
SSK1YLR006C PST2Q12335 198 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C PAA1Q12447 191 aaKnown RBP5.41□□□□□ -1.54
SSK1YLR006C RIB3Q99258 208 aa5.41□□□□□ -1.54
SSK1YLR006C URA3P03962 267 aa5.4□□□□□ -1.54
SSK1YLR006C RPL27AP0C2H6 136 aaKnown RBP5.4□□□□□ -1.54
SSK1YLR006C RPL27BP0C2H7 136 aaKnown RBP5.4□□□□□ -1.54
SSK1YLR006C SEC12P11655 471 aa5.4□□□□□ -1.54
SSK1YLR006C NTH1P32356 751 aa5.4□□□□□ -1.54
SSK1YLR006C TCA17P32613 152 aa5.4□□□□□ -1.54
SSK1YLR006C CBT1P36038 271 aaPredicted RBP5.4□□□□□ -1.54
SSK1YLR006C BUD8P41698 603 aa5.4□□□□□ -1.54
SSK1YLR006C NQM1P53228 333 aaPredicted RBP5.4□□□□□ -1.54
SSK1YLR006C DML1Q03652 475 aa5.4□□□□□ -1.54
SSK1YLR006C RAD34Q06665 692 aa5.4□□□□□ -1.54
SSK1YLR006C STP4Q07351 490 aa5.4□□□□□ -1.54
SSK1YLR006C MFG1Q07684 458 aa5.4□□□□□ -1.54
SSK1YLR006C QCR7P00128 127 aa5.39□□□□□ -1.55
SSK1YLR006C RPL3P14126 387 aaKnown RBP5.39□□□□□ -1.55
SSK1YLR006C PTP1P25044 335 aa5.39□□□□□ -1.55
SSK1YLR006C ADH7P25377 361 aa5.39□□□□□ -1.55
SSK1YLR006C YKL071WP36086 256 aa5.39□□□□□ -1.55
SSK1YLR006C GLY1P37303 387 aaKnown RBP5.39□□□□□ -1.55
SSK1YLR006C GPX2P38143 162 aa5.39□□□□□ -1.55
SSK1YLR006C MIT1P40002 666 aa5.39□□□□□ -1.55
SSK1YLR006C POG1P40473 351 aa5.39□□□□□ -1.55
SSK1YLR006C DPB11P47027 764 aaPredicted RBP5.39□□□□□ -1.55
SSK1YLR006C HOC1P47124 396 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms