RNA–Protein interactions for RNA: YIL118W

RHO3, Transcript of Non-essential small GTPase of the Rho/Rac family of Ras-like proteins, yeast

Gene RHO3, Length 696 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RHO3	YIL118W	RPS28B	P0C0X0	67 aa	Known RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	YBR121C-A	P0C5L4	52 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	MIR1	P23641	311 aa	Known RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	SYN8	P31377	255 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	ECM25	P32525	599 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	RAD23	P32628	398 aa	Known RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	SKG6	P32900	734 aa	Predicted RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	WBP1	P33767	430 aa	Known RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	FLO10	P36170	1169 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	BNA4	P38169	460 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	YBR062C	P38239	180 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	YBR220C	P38318	560 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	MAM33	P40513	266 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	GTT1	P40582	234 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	IME4	P41833	600 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	SER2	P42941	309 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	GUF1	P46943	645 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	DPB11	P47027	764 aa	Predicted RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	YAE1	P47118	141 aa	Predicted RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	YTP1	P53584	459 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	CAF40	P53829	373 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	NRK1	P53915	240 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	COG5	P53951	403 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	TPS1	Q00764	495 aa	Known RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	MTD1	Q02046	320 aa	Known RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	YPL113C	Q02961	396 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	YDR124W	Q04608	324 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	PEX10	Q05568	337 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	TPO3	Q06451	622 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	YPL199C	Q08954	240 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	FCY22	Q12119	530 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	COX17	Q12287	69 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	RPS28A	Q3E7X9	67 aa	Predicted RBP	5.07	□□□□□ -1.6
RHO3	YIL118W	RGS2	Q99188	309 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	FSH3	Q99369	266 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	IRC20	Q06554	1556 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	VPS15	P22219	1454 aa		5.07	□□□□□ -1.6
RHO3	YIL118W	LYS2	P07702	1392 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	COX2	P00410	251 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	CDC7	P06243	507 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	ATP1	P07251	545 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	MRP1	P10662	321 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	MRP2	P10663	115 aa	Predicted RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	NAM2	P11325	894 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	DPM1	P14020	267 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	ATP10	P18496	279 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	SCL1	P21243	252 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	TMT1	P32643	299 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YPT7	P32939	208 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	LHP1	P33399	275 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	JEN1	P36035	616 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	DRE2	P36152	348 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	SKG1	P36169	355 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	VHC1	P38329	1120 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	SHG1	P38337	142 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	PRS3	P38689	320 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	LEU5	P38702	357 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YHR122W	P38829	231 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	ATG7	P38862	630 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	ALP1	P38971	573 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	ERV46	P39727	415 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	PAC2	P39937	518 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	PAC11	P40960	533 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	FMP32	P43557	207 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	CTK3	P46963	296 aa	Predicted RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	YJL016W	P47072	561 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	GPI14	P47088	403 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	SOL1	P50278	321 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	NMA2	P53204	395 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	PFA5	Q03289	374 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YDR391C	Q04170	232 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YMR253C	Q04835	414 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	DPP1	Q05521	289 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YDR278C	Q05612	105 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YLR407W	Q06070	228 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YLR177W	Q06251	628 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	RAD34	Q06665	692 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YPR078C	Q06813	372 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YJR112W-A	Q3E743	109 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YCF1	P39109	1515 aa	Known RBP	5.06	□□□□□ -1.6
RHO3	YIL118W	TY1B-H	O13535	1793 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	YOR1	P53049	1477 aa		5.06	□□□□□ -1.6
RHO3	YIL118W	DDI2	P0CH63	225 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	DDI3	P0CH64	225 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	RPS16A	P0CX51	143 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	RPS16B	P0CX52	143 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	POX1	P13711	748 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	RPL3	P14126	387 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	CUP2	P15315	225 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	ERD2	P18414	219 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	RPO26	P20435	155 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	IME1	P21190	360 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	IDP1	P21954	428 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	TRR1	P29509	319 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	ERG9	P29704	444 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
RHO3	YIL118W	MRPL15	P36523	253 aa		5.05	□□□□□ -1.6
RHO3	YIL118W	ZTA1	P38230	334 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	SRP68	P38687	599 aa	Known RBP	5.05	□□□□□ -1.6
RHO3	YIL118W	YHR210C	P38893	341 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms