RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W SFP1P32432 683 aa5.52□□□□□ -1.53
SKN1YGR143W ARO4P32449 370 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W PDC2P32896 925 aa5.52□□□□□ -1.53
SKN1YGR143W DRE2P36152 348 aa5.52□□□□□ -1.53
SKN1YGR143W YPT31P38555 223 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W RPF1P38805 295 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W SMB1P40018 196 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W ATF1P40353 525 aa5.52□□□□□ -1.53
SKN1YGR143W YIL067CP40514 678 aa5.52□□□□□ -1.53
SKN1YGR143W PMT6P42934 759 aa5.52□□□□□ -1.53
SKN1YGR143W BUD13P46947 266 aaPredicted RBP5.52□□□□□ -1.53
SKN1YGR143W TAX4P47030 604 aa5.52□□□□□ -1.53
SKN1YGR143W YNL134CP53912 376 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W CDD1Q06549 142 aa5.52□□□□□ -1.53
SKN1YGR143W YLR361C-AQ3E795 98 aa5.52□□□□□ -1.53
SKN1YGR143W YDR034W-BQ6Q5X2 51 aa5.52□□□□□ -1.53
SKN1YGR143W MEX67Q99257 599 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W MED11Q99278 115 aa5.52□□□□□ -1.53
SKN1YGR143W DDI2P0CH63 225 aa5.52□□□□□ -1.53
SKN1YGR143W DDI3P0CH64 225 aa5.52□□□□□ -1.53
SKN1YGR143W COS9P36034 407 aa5.52□□□□□ -1.53
SKN1YGR143W MBA1P38300 278 aa5.52□□□□□ -1.53
SKN1YGR143W HIS2P38635 335 aa5.52□□□□□ -1.53
SKN1YGR143W COG3P40094 801 aa5.52□□□□□ -1.53
SKN1YGR143W PGD1P40356 397 aa5.52□□□□□ -1.53
SKN1YGR143W YIL108WP40483 696 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W PET130P47065 347 aa5.52□□□□□ -1.53
SKN1YGR143W TAD1P53065 400 aa5.52□□□□□ -1.53
SKN1YGR143W MTO1P53070 669 aa5.52□□□□□ -1.53
SKN1YGR143W SGF73P53165 657 aa5.52□□□□□ -1.53
SKN1YGR143W YGR126WP53274 230 aa5.52□□□□□ -1.53
SKN1YGR143W MPP6P53725 186 aaPredicted RBP5.52□□□□□ -1.53
SKN1YGR143W ACT1P60010 375 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W RPA49Q01080 415 aaPredicted RBP5.52□□□□□ -1.53
SKN1YGR143W YMR187CQ03236 431 aa5.52□□□□□ -1.53
SKN1YGR143W GIS1Q03833 894 aa5.52□□□□□ -1.53
SKN1YGR143W TMN2Q04562 672 aa5.52□□□□□ -1.53
SKN1YGR143W RSF1Q05043 376 aa5.52□□□□□ -1.53
SKN1YGR143W FDH1Q08911 376 aa5.52□□□□□ -1.53
SKN1YGR143W TPO4Q12256 659 aa5.52□□□□□ -1.53
SKN1YGR143W PDH1Q12428 516 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W FLP1P03870 423 aa5.51□□□□□ -1.53
SKN1YGR143W QCR2P07257 368 aa5.51□□□□□ -1.53
SKN1YGR143W SCL1P21243 252 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W MAG1P22134 296 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W NAR1P23503 491 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W UGX2P32772 223 aa5.51□□□□□ -1.53
SKN1YGR143W HIS7P33734 552 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W DOA1P36037 715 aa5.51□□□□□ -1.53
SKN1YGR143W RIB5P38145 238 aa5.51□□□□□ -1.53
SKN1YGR143W RMD8P43620 662 aa5.51□□□□□ -1.53
SKN1YGR143W YDR366CP87287 132 aa5.51□□□□□ -1.53
SKN1YGR143W SEC13Q04491 297 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W YDR222WQ04925 415 aa5.51□□□□□ -1.53
SKN1YGR143W YDL057WQ07379 328 aa5.51□□□□□ -1.53
SKN1YGR143W YPL199CQ08954 240 aa5.51□□□□□ -1.53
SKN1YGR143W ENV7Q12003 364 aa5.51□□□□□ -1.53
SKN1YGR143W RDL1Q12305 139 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W CPR1P14832 162 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W RBK1P25332 333 aa5.51□□□□□ -1.53
SKN1YGR143W ELO2P25358 347 aa5.51□□□□□ -1.53
SKN1YGR143W BUB3P26449 341 aa5.51□□□□□ -1.53
SKN1YGR143W SUA7P29055 345 aaPredicted RBP5.51□□□□□ -1.53
SKN1YGR143W YSC84P32793 468 aa5.51□□□□□ -1.53
SKN1YGR143W SRY1P36007 326 aa5.51□□□□□ -1.53
SKN1YGR143W MCH2P36032 473 aa5.51□□□□□ -1.53
SKN1YGR143W EHT1P38295 451 aa5.51□□□□□ -1.53
SKN1YGR143W PRS3P38689 320 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W JHD1P40034 492 aa5.51□□□□□ -1.53
SKN1YGR143W GPP2P40106 250 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W PRM2P40534 656 aa5.51□□□□□ -1.53
SKN1YGR143W YJL045WP47052 634 aa5.51□□□□□ -1.53
SKN1YGR143W YPL067CQ02754 198 aa5.51□□□□□ -1.53
SKN1YGR143W DIG2Q03373 323 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W YDR132CQ03900 495 aa5.51□□□□□ -1.53
SKN1YGR143W YDR278CQ05612 105 aa5.51□□□□□ -1.53
SKN1YGR143W YLR413WQ06689 675 aa5.51□□□□□ -1.53
SKN1YGR143W PKH2Q12236 1081 aaKnown RBP5.51□□□□□ -1.53
SKN1YGR143W STE2D6VTK4 431 aa5.5□□□□□ -1.53
SKN1YGR143W CYT1P07143 309 aa5.5□□□□□ -1.53
SKN1YGR143W BCY1P07278 416 aaKnown RBP5.5□□□□□ -1.53
SKN1YGR143W ASP3-2P0CX77 362 aa5.5□□□□□ -1.53
SKN1YGR143W ASP3-3P0CX78 362 aa5.5□□□□□ -1.53
SKN1YGR143W ASP3-4P0CX79 362 aa5.5□□□□□ -1.53
SKN1YGR143W ASP3-1P0CZ17 362 aa5.5□□□□□ -1.53
SKN1YGR143W FUB1P25659 250 aa5.5□□□□□ -1.53
SKN1YGR143W UPS2P35200 230 aa5.5□□□□□ -1.53
SKN1YGR143W FRE2P36033 711 aa5.5□□□□□ -1.53
SKN1YGR143W YBR197CP38306 217 aa5.5□□□□□ -1.53
SKN1YGR143W TAE1P38340 232 aa5.5□□□□□ -1.53
SKN1YGR143W YHL041WP38730 149 aa5.5□□□□□ -1.53
SKN1YGR143W GEP4P38812 185 aa5.5□□□□□ -1.53
SKN1YGR143W ASG7P46993 209 aa5.5□□□□□ -1.53
SKN1YGR143W YJL163CP46996 555 aa5.5□□□□□ -1.53
SKN1YGR143W YGL185CP53100 379 aa5.5□□□□□ -1.53
SKN1YGR143W NPY1P53164 384 aa5.5□□□□□ -1.53
SKN1YGR143W YMR155WQ03795 547 aa5.5□□□□□ -1.53
SKN1YGR143W ATG39Q06159 398 aa5.5□□□□□ -1.53
SKN1YGR143W PEX27Q08580 376 aa5.5□□□□□ -1.53
SKN1YGR143W SRL2Q12020 392 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 181.2 ms