RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB7, Length 423 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB7	YDR308C	ERG9	P29704	444 aa		2.67	□□□□□ -1.98
SRB7	YDR308C	TPS2	P31688	896 aa	Known RBP	2.67	□□□□□ -1.98
SRB7	YDR308C	RAD23	P32628	398 aa	Known RBP	2.67	□□□□□ -1.98
SRB7	YDR308C	SKG6	P32900	734 aa	Predicted RBP	2.67	□□□□□ -1.98
SRB7	YDR308C	KTI12	P34253	313 aa	Known RBP	2.67	□□□□□ -1.98
SRB7	YDR308C	DBP7	P36120	742 aa	Known RBP	2.67	□□□□□ -1.98
SRB7	YDR308C	EFM1	P38732	585 aa		2.67	□□□□□ -1.98
SRB7	YDR308C	PDR16	P53860	351 aa	Known RBP	2.67	□□□□□ -1.98
SRB7	YDR308C	VPS63	O13549	108 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	FUS3	P16892	353 aa	Known RBP	2.66	□□□□□ -1.98
SRB7	YDR308C	RBK1	P25332	333 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	YEL043W	P32618	956 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	YCH1	P42937	148 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	NAS6	P50086	228 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	INP1	Q03694	420 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	YPR195C	Q06594	109 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	TAF10	Q12030	206 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	YOL085C	Q99345	113 aa		2.66	□□□□□ -1.98
SRB7	YDR308C	CKA2	P19454	339 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	ITR2	P30606	609 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	MEI5	P32489	222 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	MMS21	P38632	267 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	BTT1	P40314	149 aa	Predicted RBP	2.65	□□□□□ -1.99
SRB7	YDR308C	HST4	P53688	370 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	SCS7	Q03529	384 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	RPN8	Q08723	338 aa	Known RBP	2.65	□□□□□ -1.99
SRB7	YDR308C	YPS3	Q12303	508 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	PSY3	Q12318	242 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	RPN6	Q12377	434 aa		2.65	□□□□□ -1.99
SRB7	YDR308C	VMA5	P31412	392 aa	Known RBP	2.64	□□□□□ -1.99
SRB7	YDR308C	TIP20	P33891	701 aa		2.64	□□□□□ -1.99
SRB7	YDR308C	TRR2	P38816	342 aa		2.64	□□□□□ -1.99
SRB7	YDR308C	BDH1	P39714	382 aa		2.64	□□□□□ -1.99
SRB7	YDR308C	UFE1	P41834	346 aa		2.64	□□□□□ -1.99
SRB7	YDR308C	RVB1	Q03940	463 aa	Known RBP	2.64	□□□□□ -1.99
SRB7	YDR308C	YDL211C	Q12121	372 aa		2.64	□□□□□ -1.99
SRB7	YDR308C	AST1	P35183	429 aa		2.63	□□□□□ -1.99
SRB7	YDR308C	PEX32	P38292	413 aa		2.63	□□□□□ -1.99
SRB7	YDR308C	YGR016W	P53209	190 aa		2.63	□□□□□ -1.99
SRB7	YDR308C	YGR168C	P53293	376 aa		2.63	□□□□□ -1.99
SRB7	YDR308C	PXR1	P53335	271 aa	Predicted RBP	2.63	□□□□□ -1.99
SRB7	YDR308C	INP2	Q03824	705 aa		2.63	□□□□□ -1.99
SRB7	YDR308C	YMR244W	Q04018	355 aa		2.63	□□□□□ -1.99
SRB7	YDR308C	RNR2	P09938	399 aa	Known RBP	2.62	□□□□□ -1.99
SRB7	YDR308C	SPS100	P13130	326 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	DCC1	P25559	380 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
SRB7	YDR308C	YIL059C	P40520	121 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	YIL054W	P40524	105 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	ASG7	P46993	209 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	TAF6	P53040	516 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	FMP48	P53233	369 aa		2.62	□□□□□ -1.99
SRB7	YDR308C	ERD1	P16151	362 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	OPI1	P21957	404 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	TRX1	P22217	103 aa	Known RBP	2.61	□□□□□ -1.99
SRB7	YDR308C	UIP5	P36137	443 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	RFT1	P38206	574 aa	Predicted RBP	2.61	□□□□□ -1.99
SRB7	YDR308C	SMF2	P38778	549 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	CAJ1	P39101	391 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	APC4	Q04601	652 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	YDR286C	Q05530	114 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	SPH1	Q06160	661 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	YDR262W	Q12331	272 aa		2.61	□□□□□ -1.99
SRB7	YDR308C	REP1	P03871	373 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	CYM1	P32898	989 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	ZRT3	P34240	503 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	PRY2	P36110	329 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	FRM2	P37261	193 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	YMR262W	P38430	313 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	CTM1	P38818	585 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	FAR10	Q06001	478 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	MRX9	Q07349	420 aa	Known RBP	2.6	□□□□□ -1.99
SRB7	YDR308C	DTD1	Q07648	150 aa	Known RBP	2.6	□□□□□ -1.99
SRB7	YDR308C	YDR018C	Q12185	396 aa		2.6	□□□□□ -1.99
SRB7	YDR308C	GAL3	P13045	520 aa		2.59	□□□□□ -1.99
SRB7	YDR308C	COX10	P21592	462 aa		2.59	□□□□□ -1.99
SRB7	YDR308C	ACB1	P31787	87 aa		2.59	□□□□□ -1.99
SRB7	YDR308C	YGL118C	P53132	145 aa		2.59	□□□□□ -1.99
SRB7	YDR308C	GMC1	Q04399	608 aa		2.59	□□□□□ -1.99
SRB7	YDR308C	CPT1	P17898	393 aa		2.58	□□□□□ -2
SRB7	YDR308C	MRPL20	P22354	195 aa	Predicted RBP	2.58	□□□□□ -2
SRB7	YDR308C	SHE4	P51534	789 aa		2.58	□□□□□ -2
SRB7	YDR308C	CAX4	P53223	239 aa		2.58	□□□□□ -2
SRB7	YDR308C	TPC1	P53257	314 aa		2.58	□□□□□ -2
SRB7	YDR308C	ZRG17	P53735	605 aa		2.58	□□□□□ -2
SRB7	YDR308C	RDL2	Q08742	149 aa	Known RBP	2.58	□□□□□ -2
SRB7	YDR308C	RPL18A	P0CX49	186 aa	Known RBP	2.57	□□□□□ -2
SRB7	YDR308C	RPL18B	P0CX50	186 aa	Known RBP	2.57	□□□□□ -2
SRB7	YDR308C	LIN1	P38852	340 aa	Predicted RBP	2.57	□□□□□ -2
SRB7	YDR308C	END3	P39013	349 aa		2.57	□□□□□ -2
SRB7	YDR308C	IRC4	Q03036	179 aa		2.57	□□□□□ -2
SRB7	YDR308C	PGC1	Q08959	321 aa		2.57	□□□□□ -2
SRB7	YDR308C	RFM1	Q12192	310 aa		2.57	□□□□□ -2
SRB7	YDR308C	CUP2	P15315	225 aa		2.56	□□□□□ -2
SRB7	YDR308C	INO2	P26798	304 aa		2.56	□□□□□ -2
SRB7	YDR308C	ZRT1	P32804	376 aa		2.56	□□□□□ -2
SRB7	YDR308C	DSE1	P40077	573 aa		2.56	□□□□□ -2
SRB7	YDR308C	NAS2	P40555	220 aa		2.56	□□□□□ -2
SRB7	YDR308C	MIC19	P43594	170 aa		2.56	□□□□□ -2
SRB7	YDR308C	FYV8	P46949	817 aa	Known RBP	2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms