RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W BDH1P39714 382 aa5.28□□□□□ -1.56
VMS1YDR049W MOG1P47123 218 aa5.28□□□□□ -1.56
VMS1YDR049W NAM8Q00539 523 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W CAC2Q04199 468 aa5.28□□□□□ -1.56
VMS1YDR049W NAT4Q04751 285 aa5.28□□□□□ -1.56
VMS1YDR049W SNT309Q06091 175 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W RPS10AQ08745 105 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W NCE102Q12207 173 aaRIP-Chip data5.28□□□□□ -1.56not detected
VMS1YDR049W JLP1Q12358 412 aa5.28□□□□□ -1.56
VMS1YDR049W RPS28AQ3E7X9 67 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W SRB8P25648 1427 aa5.28□□□□□ -1.56
VMS1YDR049W RPO41P13433 1351 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W ADE5,7P07244 802 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W DST1P07273 309 aa5.28□□□□□ -1.56
VMS1YDR049W COS2P0CX12 379 aa5.28□□□□□ -1.56
VMS1YDR049W COS3P0CX13 379 aa5.28□□□□□ -1.56
VMS1YDR049W PET54P10834 293 aa5.28□□□□□ -1.56
VMS1YDR049W SNF3P10870 884 aa5.28□□□□□ -1.56
VMS1YDR049W DPM1P14020 267 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W AAT2P23542 418 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W RNA15P25299 296 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W UBC8P28263 218 aa5.28□□□□□ -1.56
VMS1YDR049W MDH3P32419 343 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
VMS1YDR049W MRPS5P33759 307 aa5.28□□□□□ -1.56
VMS1YDR049W SWD2P36104 329 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W DBP8P38719 431 aa5.28□□□□□ -1.56
VMS1YDR049W FMP52P40008 231 aa5.28□□□□□ -1.56
VMS1YDR049W TAD2P47058 250 aa5.28□□□□□ -1.56
VMS1YDR049W JHD2P47156 728 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W YMR187CQ03236 431 aa5.28□□□□□ -1.56
VMS1YDR049W TRM82Q03774 444 aa5.28□□□□□ -1.56
VMS1YDR049W DLT1Q04216 342 aa5.28□□□□□ -1.56
VMS1YDR049W SEC13Q04491 297 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W MRPL51Q06090 140 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W YDL057WQ07379 328 aa5.28□□□□□ -1.56
VMS1YDR049W IZH3Q07959 543 aa5.28□□□□□ -1.56
VMS1YDR049W THP1Q08231 455 aa5.28□□□□□ -1.56
VMS1YDR049W RKM5Q12367 367 aa5.28□□□□□ -1.56
VMS1YDR049W GEA1P47102 1408 aaPredicted RBP5.28□□□□□ -1.56
VMS1YDR049W PDR15Q04182 1529 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W NHP6AP11632 93 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W GCY1P14065 312 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
VMS1YDR049W CPT1P17898 393 aa5.27□□□□□ -1.57
VMS1YDR049W AIM17P23180 465 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W SLM5P25345 492 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W TIP20P33891 701 aa5.27□□□□□ -1.57
VMS1YDR049W SHE3P38272 425 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W RPP1P38786 293 aa5.27□□□□□ -1.57
VMS1YDR049W LSB3P43603 459 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W RPS10BP46784 105 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W CCC1P47818 322 aa5.27□□□□□ -1.57
VMS1YDR049W PRP24P49960 444 aaKnown RBP5.27□□□□□ -1.57
VMS1YDR049W NUP49Q02199 472 aa5.27□□□□□ -1.57
VMS1YDR049W YDR209CQ03480 137 aa5.27□□□□□ -1.57
VMS1YDR049W LDS2Q08218 356 aa5.27□□□□□ -1.57
VMS1YDR049W RRP42Q12277 265 aaPredicted RBP5.27□□□□□ -1.57
VMS1YDR049W TSC11P40061 1430 aa5.27□□□□□ -1.57
VMS1YDR049W ESC1Q03661 1658 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W ZWF1P11412 505 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W GAS1P22146 559 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W AIM26P32858 118 aa5.26□□□□□ -1.57
VMS1YDR049W TCM62P38228 572 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W AIM3P38266 947 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W PHO90P39535 881 aa5.26□□□□□ -1.57
VMS1YDR049W SHO1P40073 367 aa5.26□□□□□ -1.57
VMS1YDR049W YGR201CP42936 225 aa5.26□□□□□ -1.57
VMS1YDR049W LYS5P50113 272 aa5.26□□□□□ -1.57
VMS1YDR049W SHY1P53266 389 aa5.26□□□□□ -1.57
VMS1YDR049W VPS62P53285 467 aa5.26□□□□□ -1.57
VMS1YDR049W RSM23Q01163 450 aa5.26□□□□□ -1.57
VMS1YDR049W HSP31Q04432 237 aa5.26□□□□□ -1.57
VMS1YDR049W PRM6Q04705 352 aa5.26□□□□□ -1.57
VMS1YDR049W YPR127WQ06494 345 aa5.26□□□□□ -1.57
VMS1YDR049W RAD34Q06665 692 aa5.26□□□□□ -1.57
VMS1YDR049W APC9Q12107 265 aa5.26□□□□□ -1.57
VMS1YDR049W DCN1Q12395 269 aa5.26□□□□□ -1.57
VMS1YDR049W SET6Q12529 373 aa5.26□□□□□ -1.57
VMS1YDR049W YLR419WQ06698 1435 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W DNF1P32660 1571 aa5.26□□□□□ -1.57
VMS1YDR049W TRP4P07285 380 aaPredicted RBP5.26□□□□□ -1.57
VMS1YDR049W YCR102CP25608 368 aa5.26□□□□□ -1.57
VMS1YDR049W MRPL6P32904 214 aa5.26□□□□□ -1.57
VMS1YDR049W MTR2P34232 184 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W RCK2P38623 610 aa5.26□□□□□ -1.57
VMS1YDR049W ANS1P38832 159 aa5.26□□□□□ -1.57
VMS1YDR049W ICP55P40051 511 aa5.26□□□□□ -1.57
VMS1YDR049W YFH7P43591 353 aa5.26□□□□□ -1.57
VMS1YDR049W TRS85P46944 698 aa5.26□□□□□ -1.57
VMS1YDR049W MIC26P50087 233 aa5.26□□□□□ -1.57
VMS1YDR049W UBP8P50102 471 aa5.26□□□□□ -1.57
VMS1YDR049W MRPS35P53292 345 aa5.26□□□□□ -1.57
VMS1YDR049W IBD2P53892 351 aa5.26□□□□□ -1.57
VMS1YDR049W MSS11Q03825 758 aa5.26□□□□□ -1.57
VMS1YDR049W YDR132CQ03900 495 aa5.26□□□□□ -1.57
VMS1YDR049W VBA1Q04301 562 aa5.26□□□□□ -1.57
VMS1YDR049W YMR114CQ04471 368 aaKnown RBP5.26□□□□□ -1.57
VMS1YDR049W FCY22Q12119 530 aa5.26□□□□□ -1.57
VMS1YDR049W YDR461C-AQ2V2P7 80 aa5.26□□□□□ -1.57
VMS1YDR049W HSP30P25619 332 aa5.25□□□□□ -1.57
VMS1YDR049W GDA1P32621 518 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms