RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	POF1	P25576	258 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	ADE1	P27616	306 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	NTH1	P32356	751 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	PMT1	P33775	817 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	YPT52	P36018	234 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	SDH4	P37298	181 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	SHE1	P38200	338 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	EFM1	P38732	585 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	POG1	P40473	351 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	BMT5	P40493	336 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	LYS20	P48570	428 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	VOA1	P53262	265 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	SHY1	P53266	389 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	BUD17	P53727	317 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	TPS1	Q00764	495 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	NUP100	Q02629	959 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	IRC15	Q02733	499 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	SSK1	Q07084	712 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	AGC1	Q12482	902 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	LEU4	P06208	619 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	SPS4	P09937	338 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	CDC34	P14682	295 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	KRE6	P32486	720 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	YPT7	P32939	208 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	ASH1	P34233	588 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	YBR053C	P38235	358 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	PEX32	P38292	413 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	FMC1	P40491	155 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	ASI3	P53983	676 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	ERO1	Q03103	563 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	HAS1	Q03532	505 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	CTK1	Q03957	528 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	ISR1	Q06098	443 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	AKR2	Q12013	749 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	YDL176W	Q12027	708 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	YLR149C	Q99296	730 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	CAR2	P07991	424 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	YOL163W	P0CF20	169 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	MRP1	P10662	321 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	MET8	P15807	274 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	HNM1	P19807	563 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	VPH1	P32563	840 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	CLB6	P32943	380 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	CHK1	P38147	527 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	CTF8	P38877	133 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	TAT2	P38967	592 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	GET2	P40056	285 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	DPB11	P47027	764 aa	Predicted RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	IBA57	P47158	497 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	SAY1	P53324	424 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	HCH1	P53834	153 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	KIN4	Q01919	800 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	MRPS17	Q03246	237 aa	Predicted RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	SWF1	Q04629	336 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	ERG27	Q12452	347 aa	Known RBP	3.76	□□□□□ -1.81
VMA1	YDL185W	MHT1	Q12525	324 aa		3.76	□□□□□ -1.81
VMA1	YDL185W	CDC9	P04819	755 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	SEC17	P32602	292 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	SFK1	P35735	353 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	PRM9	P39551	298 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	MEP1	P40260	492 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	YIL108W	P40483	696 aa	Known RBP	3.75	□□□□□ -1.81
VMA1	YDL185W	CAT5	P41735	233 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	VMA21	P41806	77 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	RTS3	P53289	263 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	YLR346C	Q06139	101 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	SDO1	Q07953	250 aa	Known RBP	3.75	□□□□□ -1.81
VMA1	YDL185W	INP53	Q12271	1107 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	MRX4	Q12467	430 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	RRI1	Q12468	440 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	YLR099W-A	Q3E798	87 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	GAL80	P04387	435 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	LRE1	P25579	583 aa	Known RBP	3.75	□□□□□ -1.81
VMA1	YDL185W	RSC6	P25632	483 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	DOA4	P32571	926 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	YHR054C	P38780	354 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	ASP1	P38986	381 aa	Predicted RBP	3.75	□□□□□ -1.81
VMA1	YDL185W	SUT1	P53032	299 aa	Known RBP	3.75	□□□□□ -1.81
VMA1	YDL185W	YGL185C	P53100	379 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	RHO4	Q00246	291 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
VMA1	YDL185W	KEI1	Q06346	221 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	AAD4	Q07747	329 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	MED7	Q08278	222 aa		3.75	□□□□□ -1.81
VMA1	YDL185W	RRG1	Q12167	365 aa	Predicted RBP	3.75	□□□□□ -1.81
VMA1	YDL185W	HIS1	P00498	297 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	ZRC1	P20107	442 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	BUD5	P25300	642 aa	Predicted RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	OAR1	P35731	278 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	ELF1	P36053	145 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	NOP16	P40007	231 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	RTT105	P40063	208 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	LOH1	P47055	219 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	ACF4	P47129	309 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	SYF2	P53277	215 aa	Predicted RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	YAF9	P53930	226 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	MET31	Q03081	177 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	HLR1	Q04429	423 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	ATG38	Q05789	226 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	NDD1	Q08887	554 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms