RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C SEC31P38968 1273 aaKnown RBP3.69□□□□□ -1.82
RPN6YDL097C MTL1P53214 551 aa3.69□□□□□ -1.82
RPN6YDL097C MTM1P53320 366 aa3.69□□□□□ -1.82
RPN6YDL097C SSL2Q00578 843 aa3.69□□□□□ -1.82
RPN6YDL097C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
RPN6YDL097C MMT1Q03218 510 aa3.69□□□□□ -1.82
RPN6YDL097C SWF1Q04629 336 aa3.69□□□□□ -1.82
RPN6YDL097C COX20Q04935 205 aa3.69□□□□□ -1.82
RPN6YDL097C YPR147CQ06522 304 aaKnown RBP3.69□□□□□ -1.82
RPN6YDL097C VAC14Q06708 880 aa3.69□□□□□ -1.82
RPN6YDL097C SUI3P09064 285 aaKnown RBP3.68□□□□□ -1.82
RPN6YDL097C RPS23AP0CX29 145 aaKnown RBP3.68□□□□□ -1.82
RPN6YDL097C RPS23BP0CX30 145 aa3.68□□□□□ -1.82
RPN6YDL097C ERG11P10614 530 aa3.68□□□□□ -1.82
RPN6YDL097C MDH3P32419 343 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
RPN6YDL097C BMT2P38278 337 aa3.68□□□□□ -1.82
RPN6YDL097C BDH2P39713 417 aa3.68□□□□□ -1.82
RPN6YDL097C YER084WP40057 128 aa3.68□□□□□ -1.82
RPN6YDL097C YMR134WP40207 237 aa3.68□□□□□ -1.82
RPN6YDL097C HYR1P40581 163 aaKnown RBP3.68□□□□□ -1.82
RPN6YDL097C MIC19P43594 170 aa3.68□□□□□ -1.82
RPN6YDL097C YFR054CP43622 192 aa3.68□□□□□ -1.82
RPN6YDL097C GCD14P46959 383 aaPredicted RBP3.68□□□□□ -1.82
RPN6YDL097C RPS12P48589 143 aaKnown RBP3.68□□□□□ -1.82
RPN6YDL097C SHE4P51534 789 aa3.68□□□□□ -1.82
RPN6YDL097C UBC13P52490 153 aa3.68□□□□□ -1.82
RPN6YDL097C LSG1P53145 640 aaKnown RBP3.68□□□□□ -1.82
RPN6YDL097C RHO4Q00246 291 aa3.68□□□□□ -1.82
RPN6YDL097C KAP120Q02932 1032 aa3.68□□□□□ -1.82
RPN6YDL097C MRP51Q02950 344 aa3.68□□□□□ -1.82
RPN6YDL097C GMC1Q04399 608 aa3.68□□□□□ -1.82
RPN6YDL097C MHT1Q12525 324 aa3.68□□□□□ -1.82
RPN6YDL097C MHF1Q3E835 90 aa3.68□□□□□ -1.82
RPN6YDL097C YLR358CO13565 187 aa3.67□□□□□ -1.82
RPN6YDL097C CBS2P14905 389 aa3.67□□□□□ -1.82
RPN6YDL097C MFT1P33441 392 aaKnown RBP3.67□□□□□ -1.82
RPN6YDL097C SET3P36124 751 aa3.67□□□□□ -1.82
RPN6YDL097C MRPL36P36531 177 aa3.67□□□□□ -1.82
RPN6YDL097C CDS1P38221 457 aa3.67□□□□□ -1.82
RPN6YDL097C END3P39013 349 aa3.67□□□□□ -1.82
RPN6YDL097C LCP5P40079 357 aaPredicted RBP3.67□□□□□ -1.82
RPN6YDL097C YNL208WP40159 199 aaKnown RBP3.67□□□□□ -1.82
RPN6YDL097C RFC4P40339 323 aaKnown RBP3.67□□□□□ -1.82
RPN6YDL097C HOS4P40480 1083 aa3.67□□□□□ -1.82
RPN6YDL097C BNA1P47096 177 aa3.67□□□□□ -1.82
RPN6YDL097C AAD10P47182 288 aa3.67□□□□□ -1.82
RPN6YDL097C SML1Q04964 104 aa3.67□□□□□ -1.82
RPN6YDL097C TAZ1Q06510 381 aa3.67□□□□□ -1.82
RPN6YDL097C AIM41Q12032 185 aa3.67□□□□□ -1.82
RPN6YDL097C ERP4Q12450 207 aa3.67□□□□□ -1.82
RPN6YDL097C APA2P22108 325 aa3.66□□□□□ -1.82
RPN6YDL097C RTT107P38850 1070 aa3.66□□□□□ -1.82
RPN6YDL097C YIL077CP40508 320 aa3.66□□□□□ -1.82
RPN6YDL097C YDL183CP48569 320 aa3.66□□□□□ -1.82
RPN6YDL097C SMM1P53720 384 aaKnown RBP3.66□□□□□ -1.82
RPN6YDL097C YNL046WP53956 172 aa3.66□□□□□ -1.82
RPN6YDL097C SWP1Q02795 286 aa3.66□□□□□ -1.82
RPN6YDL097C DIG1Q03063 452 aaKnown RBP3.66□□□□□ -1.82
RPN6YDL097C TPO3Q06451 622 aa3.66□□□□□ -1.82
RPN6YDL097C PRP11Q07350 266 aaPredicted RBP3.66□□□□□ -1.82
RPN6YDL097C GAT3Q07928 141 aa3.66□□□□□ -1.82
RPN6YDL097C ENB1Q08299 606 aa3.66□□□□□ -1.82
RPN6YDL097C SGT1Q08446 395 aa3.66□□□□□ -1.82
RPN6YDL097C GRE1Q08969 168 aa3.66□□□□□ -1.82
RPN6YDL097C YCL012CQ8J0M4 134 aa3.66□□□□□ -1.82
RPN6YDL097C RAD52P06778 471 aaKnown RBP3.65□□□□□ -1.83
RPN6YDL097C UNG1P12887 359 aa3.65□□□□□ -1.83
RPN6YDL097C FEN2P25621 512 aaKnown RBP3.65□□□□□ -1.83
RPN6YDL097C SOF1P33750 489 aaKnown RBP3.65□□□□□ -1.83
RPN6YDL097C SWH1P35845 1188 aa3.65□□□□□ -1.83
RPN6YDL097C COS111P38308 924 aa3.65□□□□□ -1.83
RPN6YDL097C ANS1P38832 159 aa3.65□□□□□ -1.83
RPN6YDL097C PHO90P39535 881 aa3.65□□□□□ -1.83
RPN6YDL097C RIO2P40160 425 aaKnown RBP3.65□□□□□ -1.83
RPN6YDL097C INP1Q03694 420 aa3.65□□□□□ -1.83
RPN6YDL097C TMA10Q06177 86 aa3.65□□□□□ -1.83
RPN6YDL097C TSR2Q06672 205 aaKnown RBP3.65□□□□□ -1.83
RPN6YDL097C YDL109CQ12103 647 aa3.65□□□□□ -1.83
RPN6YDL097C GET4Q12125 312 aa3.65□□□□□ -1.83
RPN6YDL097C WTM1Q12363 437 aaKnown RBP3.65□□□□□ -1.83
RPN6YDL097C YAL064W-BO13512 126 aa3.64□□□□□ -1.83
RPN6YDL097C MET3P08536 511 aa3.64□□□□□ -1.83
RPN6YDL097C SEC12P11655 471 aa3.64□□□□□ -1.83
RPN6YDL097C SPO16P17122 198 aa3.64□□□□□ -1.83
RPN6YDL097C THR1P17423 357 aaKnown RBP3.64□□□□□ -1.83
RPN6YDL097C PET123P17558 318 aa3.64□□□□□ -1.83
RPN6YDL097C AAD3P25612 363 aa3.64□□□□□ -1.83
RPN6YDL097C ARP2P32381 391 aaKnown RBP3.64□□□□□ -1.83
RPN6YDL097C HXT1P32465 570 aa3.64□□□□□ -1.83
RPN6YDL097C ZUO1P32527 433 aaKnown RBP3.64□□□□□ -1.83
RPN6YDL097C CLB6P32943 380 aa3.64□□□□□ -1.83
RPN6YDL097C RCK1P38622 512 aa3.64□□□□□ -1.83
RPN6YDL097C REV7P38927 245 aa3.64□□□□□ -1.83
RPN6YDL097C PMT6P42934 759 aa3.64□□□□□ -1.83
RPN6YDL097C COS1P53822 381 aa3.64□□□□□ -1.83
RPN6YDL097C RNY1Q02933 434 aaKnown RBP3.64□□□□□ -1.83
RPN6YDL097C MTG1Q03151 367 aaPredicted RBP3.64□□□□□ -1.83
RPN6YDL097C YMR102CQ03177 834 aa3.64□□□□□ -1.83
RPN6YDL097C YMR279CQ03263 540 aa3.64□□□□□ -1.83
RPN6YDL097C EKI1Q03764 534 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms