RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W PIN3Q06449 215 aa2.8□□□□□ -1.96
UBC9YDL064W REP1P03871 373 aa2.79□□□□□ -1.96
UBC9YDL064W CDC37P06101 506 aaKnown RBP2.79□□□□□ -1.96
UBC9YDL064W EPT1P22140 391 aa2.79□□□□□ -1.96
UBC9YDL064W MID2P36027 376 aa2.79□□□□□ -1.96
UBC9YDL064W YKL162CP36052 402 aa2.79□□□□□ -1.96
UBC9YDL064W PCH2P38126 564 aa2.79□□□□□ -1.96
UBC9YDL064W END3P39013 349 aa2.79□□□□□ -1.96
UBC9YDL064W CAB5Q03941 241 aa2.79□□□□□ -1.96
UBC9YDL064W YMR111CQ04461 462 aaPredicted RBP2.79□□□□□ -1.96
UBC9YDL064W PAA1Q12447 191 aaKnown RBP2.79□□□□□ -1.96
UBC9YDL064W TPI1P00942 248 aaKnown RBP2.78□□□□□ -1.96
UBC9YDL064W BGL2P15703 313 aaKnown RBP2.78□□□□□ -1.96
UBC9YDL064W VMA5P31412 392 aaKnown RBP2.78□□□□□ -1.96
UBC9YDL064W MRPS9P38120 278 aa2.78□□□□□ -1.96
UBC9YDL064W SHE3P38272 425 aaKnown RBP2.78□□□□□ -1.96
UBC9YDL064W SWC5P38326 303 aa2.78□□□□□ -1.96
UBC9YDL064W FHL1P39521 936 aa2.78□□□□□ -1.96
UBC9YDL064W PES4P39684 611 aa2.78□□□□□ -1.96
UBC9YDL064W SSO2P39926 295 aa2.78□□□□□ -1.96
UBC9YDL064W HCH1P53834 153 aa2.78□□□□□ -1.96
UBC9YDL064W MGR3Q04472 501 aa2.78□□□□□ -1.96
UBC9YDL064W CUR1Q06469 252 aa2.78□□□□□ -1.96
UBC9YDL064W YPQ1Q12010 308 aa2.78□□□□□ -1.96
UBC9YDL064W RTC5Q12108 567 aaKnown RBP2.78□□□□□ -1.96
UBC9YDL064W YBL111CQ3E7Y5 667 aa2.78□□□□□ -1.96
UBC9YDL064W CBP2P03874 630 aaPredicted RBP2.77□□□□□ -1.97
UBC9YDL064W BUD2P33314 1104 aa2.77□□□□□ -1.97
UBC9YDL064W TAE1P38340 232 aa2.77□□□□□ -1.97
UBC9YDL064W YDR089WP38966 869 aa2.77□□□□□ -1.97
UBC9YDL064W GGC1P38988 300 aa2.77□□□□□ -1.97
UBC9YDL064W FET3P38993 636 aa2.77□□□□□ -1.97
UBC9YDL064W YFR018CP43599 363 aa2.77□□□□□ -1.97
UBC9YDL064W RVB1Q03940 463 aaKnown RBP2.77□□□□□ -1.97
UBC9YDL064W API2Q04413 109 aa2.77□□□□□ -1.97
UBC9YDL064W FAR10Q06001 478 aa2.77□□□□□ -1.97
UBC9YDL064W YOL029CQ08187 201 aa2.77□□□□□ -1.97
UBC9YDL064W MMT2Q08970 484 aa2.77□□□□□ -1.97
UBC9YDL064W MDY2Q12285 212 aa2.77□□□□□ -1.97
UBC9YDL064W LDB17Q12342 491 aa2.77□□□□□ -1.97
UBC9YDL064W YAL067W-AQ8TGK6 75 aa2.77□□□□□ -1.97
UBC9YDL064W RBK1P25332 333 aa2.76□□□□□ -1.97
UBC9YDL064W YKL071WP36086 256 aa2.76□□□□□ -1.97
UBC9YDL064W DBP7P36120 742 aaKnown RBP2.76□□□□□ -1.97
UBC9YDL064W RIB4P50861 169 aaPredicted RBP2.76□□□□□ -1.97
UBC9YDL064W NRM1P53718 249 aa2.76□□□□□ -1.97
UBC9YDL064W DBP6P53734 629 aaKnown RBP2.76□□□□□ -1.97
UBC9YDL064W RNY1Q02933 434 aaKnown RBP2.76□□□□□ -1.97
UBC9YDL064W YLR297WQ05899 129 aa2.76□□□□□ -1.97
UBC9YDL064W MIM1Q08176 113 aa2.76□□□□□ -1.97
UBC9YDL064W YDR018CQ12185 396 aa2.76□□□□□ -1.97
UBC9YDL064W FLO11P08640 1367 aa2.75□□□□□ -1.97
UBC9YDL064W MHP1P43638 1398 aa2.75□□□□□ -1.97
UBC9YDL064W SPS19P32573 292 aaKnown RBP2.75□□□□□ -1.97
UBC9YDL064W CYM1P32898 989 aa2.75□□□□□ -1.97
UBC9YDL064W RCK1P38622 512 aa2.75□□□□□ -1.97
UBC9YDL064W ECM34P38728 170 aa2.75□□□□□ -1.97
UBC9YDL064W PET8P38921 284 aa2.75□□□□□ -1.97
UBC9YDL064W YER184CP39961 794 aa2.75□□□□□ -1.97
UBC9YDL064W YFL040WP43562 540 aa2.75□□□□□ -1.97
UBC9YDL064W YFL012WP43580 148 aa2.75□□□□□ -1.97
UBC9YDL064W RDL2Q08742 149 aaKnown RBP2.75□□□□□ -1.97
UBC9YDL064W APC2Q12440 853 aa2.75□□□□□ -1.97
UBC9YDL064W STE2D6VTK4 431 aa2.74□□□□□ -1.97
UBC9YDL064W PET18P25362 215 aa2.74□□□□□ -1.97
UBC9YDL064W ITR2P30606 609 aa2.74□□□□□ -1.97
UBC9YDL064W ACB1P31787 87 aa2.74□□□□□ -1.97
UBC9YDL064W MEI5P32489 222 aa2.74□□□□□ -1.97
UBC9YDL064W CBF5P33322 483 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
UBC9YDL064W TIP20P33891 701 aa2.74□□□□□ -1.97
UBC9YDL064W KTI12P34253 313 aaKnown RBP2.74□□□□□ -1.97
UBC9YDL064W UTP25P40498 721 aaKnown RBP2.74□□□□□ -1.97
UBC9YDL064W FLC3P53121 802 aa2.74□□□□□ -1.97
UBC9YDL064W SED5Q01590 340 aa2.74□□□□□ -1.97
UBC9YDL064W YPL080CQ02826 108 aa2.74□□□□□ -1.97
UBC9YDL064W YMR244WQ04018 355 aa2.74□□□□□ -1.97
UBC9YDL064W ECM11Q04110 302 aa2.74□□□□□ -1.97
UBC9YDL064W MNN9P39107 395 aaKnown RBP2.73□□□□□ -1.97
UBC9YDL064W DSE1P40077 573 aa2.73□□□□□ -1.97
UBC9YDL064W INA22P40576 216 aa2.73□□□□□ -1.97
UBC9YDL064W PMT4P46971 762 aa2.73□□□□□ -1.97
UBC9YDL064W YGR067CP53243 804 aa2.73□□□□□ -1.97
UBC9YDL064W INP1Q03694 420 aa2.73□□□□□ -1.97
UBC9YDL064W MRX9Q07349 420 aaKnown RBP2.73□□□□□ -1.97
UBC9YDL064W YLR012CQ07927 99 aa2.73□□□□□ -1.97
UBC9YDL064W RPN8Q08723 338 aaKnown RBP2.73□□□□□ -1.97
UBC9YDL064W SAM4Q08985 325 aaKnown RBP2.73□□□□□ -1.97
UBC9YDL064W AUS1Q08409 1394 aa2.73□□□□□ -1.97
UBC9YDL064W CAR2P07991 424 aaKnown RBP2.72□□□□□ -1.97
UBC9YDL064W CTA1P15202 515 aa2.72□□□□□ -1.97
UBC9YDL064W MSS116P15424 664 aaKnown RBP2.72□□□□□ -1.97
UBC9YDL064W COX10P21592 462 aa2.72□□□□□ -1.97
UBC9YDL064W RAD23P32628 398 aaKnown RBP2.72□□□□□ -1.97
UBC9YDL064W OKP1P53298 406 aa2.72□□□□□ -1.97
UBC9YDL064W PBP4Q07362 185 aaKnown RBP2.72□□□□□ -1.97
UBC9YDL064W YPR1Q12458 312 aa2.72□□□□□ -1.97
UBC9YDL064W RPS19AP07280 144 aaKnown RBP2.71□□□□□ -1.98
UBC9YDL064W RPS19BP07281 144 aaPredicted RBP2.71□□□□□ -1.98
UBC9YDL064W GCD2P12754 651 aaPredicted RBP2.71□□□□□ -1.98
UBC9YDL064W ZRT1P32804 376 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms