RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W DBF20P32328 564 aa5.14□□□□□ -1.59
SHP1YBL058W PUP2P32379 260 aa5.14□□□□□ -1.59
SHP1YBL058W MRP8P35719 219 aa5.14□□□□□ -1.59
SHP1YBL058W SWH1P35845 1188 aa5.14□□□□□ -1.59
SHP1YBL058W YBR220CP38318 560 aa5.14□□□□□ -1.59
SHP1YBL058W RRP4P38792 359 aaKnown RBP5.14□□□□□ -1.59
SHP1YBL058W IMA5P40884 581 aa5.14□□□□□ -1.59
SHP1YBL058W HXT9P40885 567 aa5.14□□□□□ -1.59
SHP1YBL058W MRK1P50873 501 aa5.14□□□□□ -1.59
SHP1YBL058W SHE4P51534 789 aa5.14□□□□□ -1.59
SHP1YBL058W TWF1P53250 332 aa5.14□□□□□ -1.59
SHP1YBL058W SNF12P53628 566 aa5.14□□□□□ -1.59
SHP1YBL058W YNL181WP53878 407 aa5.14□□□□□ -1.59
SHP1YBL058W RPL15BP54780 204 aaPredicted RBP5.14□□□□□ -1.59
SHP1YBL058W HXT11P54862 567 aa5.14□□□□□ -1.59
SHP1YBL058W KAP120Q02932 1032 aa5.14□□□□□ -1.59
SHP1YBL058W KRE28Q04431 385 aa5.14□□□□□ -1.59
SHP1YBL058W IRC19Q07843 230 aa5.14□□□□□ -1.59
SHP1YBL058W DYN1P36022 4092 aa5.13□□□□□ -1.59
SHP1YBL058W TPK2P06245 380 aa5.13□□□□□ -1.59
SHP1YBL058W EXO70P19658 623 aa5.13□□□□□ -1.59
SHP1YBL058W DBP3P20447 523 aaKnown RBP5.13□□□□□ -1.59
SHP1YBL058W CLB2P24869 491 aa5.13□□□□□ -1.59
SHP1YBL058W MRE11P32829 692 aa5.13□□□□□ -1.59
SHP1YBL058W SOF1P33750 489 aaKnown RBP5.13□□□□□ -1.59
SHP1YBL058W MTW1P39731 289 aa5.13□□□□□ -1.59
SHP1YBL058W MOB2P43563 287 aa5.13□□□□□ -1.59
SHP1YBL058W YJR142WP47173 342 aa5.13□□□□□ -1.59
SHP1YBL058W GNP1P48813 663 aa5.13□□□□□ -1.59
SHP1YBL058W DIA3P52290 468 aa5.13□□□□□ -1.59
SHP1YBL058W ERP6P53198 216 aa5.13□□□□□ -1.59
SHP1YBL058W MFG1Q07684 458 aa5.13□□□□□ -1.59
SHP1YBL058W RSC58Q07979 502 aa5.13□□□□□ -1.59
SHP1YBL058W DIA2Q08496 732 aaPredicted RBP5.13□□□□□ -1.59
SHP1YBL058W NIP7Q08962 181 aaKnown RBP5.13□□□□□ -1.59
SHP1YBL058W MED2Q12124 431 aa5.13□□□□□ -1.59
SHP1YBL058W ATP2P00830 511 aaKnown RBP5.12□□□□□ -1.59
SHP1YBL058W ATP6P00854 259 aa5.12□□□□□ -1.59
SHP1YBL058W HSP30P25619 332 aa5.12□□□□□ -1.59
SHP1YBL058W SAC1P32368 623 aaKnown RBP5.12□□□□□ -1.59
SHP1YBL058W SPC29P33419 253 aa5.12□□□□□ -1.59
SHP1YBL058W IST2P38250 946 aa5.12□□□□□ -1.59
SHP1YBL058W AIM3P38266 947 aaKnown RBP5.12□□□□□ -1.59
SHP1YBL058W YHL044WP38727 235 aa5.12□□□□□ -1.59
SHP1YBL058W YHR097CP38809 366 aaKnown RBP5.12□□□□□ -1.59
SHP1YBL058W HPM1P40481 377 aa5.12□□□□□ -1.59
SHP1YBL058W MET28P40573 187 aa5.12□□□□□ -1.59
SHP1YBL058W HNT2P49775 206 aa5.12□□□□□ -1.59
SHP1YBL058W MNT4P53745 580 aa5.12□□□□□ -1.59
SHP1YBL058W IGO1P53897 168 aa5.12□□□□□ -1.59
SHP1YBL058W ASI1P54074 624 aa5.12□□□□□ -1.59
SHP1YBL058W RPL6AQ02326 176 aaKnown RBP5.12□□□□□ -1.59
SHP1YBL058W SCS7Q03529 384 aa5.12□□□□□ -1.59
SHP1YBL058W SPO77Q06134 477 aa5.12□□□□□ -1.59
SHP1YBL058W NSL1Q12143 216 aa5.12□□□□□ -1.59
SHP1YBL058W DFG16Q99234 619 aa5.12□□□□□ -1.59
SHP1YBL058W THP2O13539 261 aaKnown RBP5.11□□□□□ -1.59
SHP1YBL058W PEP4P07267 405 aaKnown RBP5.11□□□□□ -1.59
SHP1YBL058W RPB8P20436 146 aa5.11□□□□□ -1.59
SHP1YBL058W ITR2P30606 609 aa5.11□□□□□ -1.59
SHP1YBL058W MDL1P33310 695 aa5.11□□□□□ -1.59
SHP1YBL058W SLC1P33333 303 aa5.11□□□□□ -1.59
SHP1YBL058W GPX1P36014 167 aa5.11□□□□□ -1.59
SHP1YBL058W RLP7P40693 322 aaKnown RBP5.11□□□□□ -1.59
SHP1YBL058W IAH1P41734 238 aa5.11□□□□□ -1.59
SHP1YBL058W POP1P41812 875 aa5.11□□□□□ -1.59
SHP1YBL058W YGR201CP42936 225 aa5.11□□□□□ -1.59
SHP1YBL058W SBH2P52871 88 aa5.11□□□□□ -1.59
SHP1YBL058W RBG2P53295 368 aaKnown RBP5.11□□□□□ -1.59
SHP1YBL058W RCE1Q03530 315 aa5.11□□□□□ -1.59
SHP1YBL058W YAP6Q03935 383 aa5.11□□□□□ -1.59
SHP1YBL058W RVB1Q03940 463 aaKnown RBP5.11□□□□□ -1.59
SHP1YBL058W NTG2Q08214 380 aa5.11□□□□□ -1.59
SHP1YBL058W RRT8Q08219 342 aa5.11□□□□□ -1.59
SHP1YBL058W RLM1Q12224 676 aa5.11□□□□□ -1.59
SHP1YBL058W YOR343CQ12484 108 aa5.11□□□□□ -1.59
SHP1YBL058W CCW14O13547 238 aa5.1□□□□□ -1.59
SHP1YBL058W SUI3P09064 285 aaKnown RBP5.1□□□□□ -1.59
SHP1YBL058W RPL35AP0CX84 120 aaKnown RBP5.1□□□□□ -1.59
SHP1YBL058W RPL35BP0CX85 120 aaKnown RBP5.1□□□□□ -1.59
SHP1YBL058W YPK2P18961 677 aa5.1□□□□□ -1.59
SHP1YBL058W TIM12P32830 109 aa5.1□□□□□ -1.59
SHP1YBL058W TRS65P32893 560 aa5.1□□□□□ -1.59
SHP1YBL058W KRE29P40026 464 aa5.1□□□□□ -1.59
SHP1YBL058W SNM1P40993 198 aa5.1□□□□□ -1.59
SHP1YBL058W ABM1P47146 123 aa5.1□□□□□ -1.59
SHP1YBL058W SIP18P50263 79 aa5.1□□□□□ -1.59
SHP1YBL058W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SHP1YBL058W SKO1Q02100 647 aa5.1□□□□□ -1.59
SHP1YBL058W RSM28Q03430 361 aa5.1□□□□□ -1.59
SHP1YBL058W SSY1Q03770 852 aa5.1□□□□□ -1.59
SHP1YBL058W HSP31Q04432 237 aa5.1□□□□□ -1.59
SHP1YBL058W YTH1Q06102 208 aaPredicted RBP5.1□□□□□ -1.59
SHP1YBL058W YPR147CQ06522 304 aaKnown RBP5.1□□□□□ -1.59
SHP1YBL058W VPS36Q06696 566 aa5.1□□□□□ -1.59
SHP1YBL058W SFM1Q12314 213 aa5.1□□□□□ -1.59
SHP1YBL058W RNH203Q12338 110 aa5.1□□□□□ -1.59
SHP1YBL058W YOL087CQ99247 1116 aa5.1□□□□□ -1.59
SHP1YBL058W CSM1P25651 190 aa5.09□□□□□ -1.59
SHP1YBL058W DAL80P26343 269 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms