RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SSBP05455 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 SLC11A1P49279 550 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 MFAP1P55081 439 aaKnown RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 ZNF484Q5JVG2 852 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 ODR4Q5SWX8 454 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 SWSAP1Q6NVH7 229 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 C15orf39Q6ZRI6 1047 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 ZNF280BQ86YH2 543 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 LRRC71Q8N4P6 559 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 PJA1Q8NG27 643 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 RRP36Q96EU6 259 aaKnown RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 WDR6Q9NNW5 1121 aaKnown RBP11.04□□□□□ -0.64
PHGDH-212ENST00000641247 ARHGEF3Q9NR81 526 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 SPTBN2O15020 2390 aa11.04□□□□□ -0.64
PHGDH-212ENST00000641247 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 DDHD2O94830 711 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 CYP21A2P08686 494 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 EIF4BP23588 611 aaKnown RBP11.03□□□□□ -0.64
PHGDH-212ENST00000641247 KLRC2P26717 231 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 SLC26A2P50443 739 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
PHGDH-212ENST00000641247 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-212ENST00000641247 STARD6P59095 220 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 GPC5P78333 572 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 GIT2Q14161 759 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 DCLRE1AQ6PJP8 1040 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 TSSK4Q6SA08 328 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 ZBTB44Q8NCP5 570 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-212ENST00000641247 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 OSBPL3Q9H4L5 887 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 ZNF302Q9NR11 478 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 NCDNQ9UBB6 729 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 DENND4AQ7Z401 1863 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 CFAP47Q6ZTR5 3102 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 COL1A2P08123 1366 aa11.03□□□□□ -0.64
PHGDH-212ENST00000641247 KAT6AQ92794 2004 aa11.02□□□□□ -0.64
PHGDH-212ENST00000641247 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 ANHXE9PGG2 379 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 MEIS1O00470 390 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 BACH1O14867 736 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 LILRB5O75023 590 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 OFD1O75665 1012 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 SPATA31D3P0C874 917 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 LAMP2P13473 410 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 RXRAP19793 462 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 RFX1P22670 979 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
PHGDH-212ENST00000641247 SNW1Q13573 536 aaKnown RBP11.02□□□□□ -0.65
PHGDH-212ENST00000641247 BMP2KLQ5H9B9 411 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 PPFIBP1Q86W92 1011 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-212ENST00000641247 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-212ENST00000641247 NELL1Q92832 810 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 RTKNQ9BST9 563 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 BACH2Q9BYV9 841 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 MAN1C1Q9NR34 630 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-212ENST00000641247 NUMBLQ9Y6R0 609 aa11.02□□□□□ -0.65
PHGDH-212ENST00000641247 PRR5-ARHGAP8B1AHC4 643 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 INPPL1O15357 1258 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 DARSP14868 501 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 CD72P21854 359 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 GPC3P51654 580 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 ARHGAP8P85298 464 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 PTH1RQ03431 593 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 DRP2Q13474 957 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 HTR4Q13639 388 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 BMS1Q14692 1282 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 ZNF528Q3MIS6 628 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 CEP55Q53EZ4 464 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 EFCAB12Q6NXP0 572 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 CATIPQ7Z7H3 387 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 RAB11FIP4Q86YS3 637 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 FGF14Q92915 247 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 DDX23Q9BUQ8 820 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 MRPL9Q9BYD2 267 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 GBP3Q9H0R5 595 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 SLC2A4RGQ9NR83 387 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 SPATA6Q9NWH7 488 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 AKT3Q9Y243 479 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 MAP1BP46821 2468 aaKnown RBP11.01□□□□□ -0.65
PHGDH-212ENST00000641247 CLUHO75153 1309 aa11.01□□□□□ -0.65
PHGDH-212ENST00000641247 SHISA7A6NL88 538 aa11□□□□□ -0.65
PHGDH-212ENST00000641247 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms