RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 U2AF2P26368 475 aaKnown RBP eCLIP18.37■□□□□ 0.539e-11■■■■□ 20.3
COLCA2-206ENST00000638573 QARSP47897 775 aaKnown RBP18.37■□□□□ 0.53
COLCA2-206ENST00000638573 TRAPPC10P48553 1259 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 BECN1Q14457 450 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 LEXMQ3ZCV2 418 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 CLLU1OSQ5K130 101 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
COLCA2-206ENST00000638573 ECHDC2Q86YB7 292 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 CASD1Q96PB1 797 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 LXNQ9BS40 222 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 CWH43Q9H720 699 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 C1orf112Q9NSG2 853 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 TMEM161AQ9NX61 479 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-206ENST00000638573 RALGAPA2Q2PPJ7 1873 aa18.37■□□□□ 0.53
COLCA2-206ENST00000638573 TBX3O15119 743 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 NEMFO60524 1076 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 TBX10O75333 385 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 MAFO75444 373 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-206ENST00000638573 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 PTCRAQ6ISU1 281 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-206ENST00000638573 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
COLCA2-206ENST00000638573 SLFN12Q8IYM2 578 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 COLGALT1Q8NBJ5 622 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 NEK9Q8TD19 979 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 LPPQ93052 612 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 PABPC5Q96DU9 382 aaKnown RBP18.36■□□□□ 0.53
COLCA2-206ENST00000638573 EPHX3Q9H6B9 360 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 MINDY3Q9H8M7 445 aa18.36■□□□□ 0.53
COLCA2-206ENST00000638573 ORC2Q13416 577 aaPredicted RBP18.35■□□□□ 0.53
COLCA2-206ENST00000638573 EPHA7Q15375 998 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 CALCRLQ16602 461 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 TTC38Q5R3I4 469 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 HELQQ8TDG4 1101 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 PLVAPQ9BX97 442 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
COLCA2-206ENST00000638573 P4HBP07237 508 aaKnown RBP18.34■□□□□ 0.53
COLCA2-206ENST00000638573 MCM7P33993 719 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 ERVFC1P60507 584 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 ZNF598Q86UK7 904 aaKnown RBP18.34■□□□□ 0.53
COLCA2-206ENST00000638573 TPH2Q8IWU9 490 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 P2RX5Q93086 422 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
COLCA2-206ENST00000638573 GCOM2Q9BZD3 368 aaPredicted RBP18.34■□□□□ 0.53
COLCA2-206ENST00000638573 LMAN2LQ9H0V9 348 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
COLCA2-206ENST00000638573 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 POTEMA6NI47 508 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 PER2O15055 1255 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 FGF18O76093 207 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 SLITRK3O94933 977 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 SYT1P21579 422 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 YWHABP31946 246 aaKnown RBP18.33■□□□□ 0.52
COLCA2-206ENST00000638573 TXKP42681 527 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 NRIP1P48552 1158 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 NBR1Q14596 966 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 RILPL1Q5EBL4 403 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 ODR4Q5SWX8 454 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 VN1R2Q8NFZ6 395 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 PRPF31Q8WWY3 499 aaKnown RBP18.33■□□□□ 0.52
COLCA2-206ENST00000638573 DHX33Q9H6R0 707 aaKnown RBP18.33■□□□□ 0.52
COLCA2-206ENST00000638573 IFT122Q9HBG6 1241 aa18.33■□□□□ 0.52
COLCA2-206ENST00000638573 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.52
COLCA2-206ENST00000638573 NT5C1B-RDH14C9J2C7 533 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 B4GALT3O60512 393 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 GLP2RO95838 553 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 SRGAP2CP0DJJ0 459 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
COLCA2-206ENST00000638573 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-206ENST00000638573 POLGP54098 1239 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-206ENST00000638573 EMC2Q15006 297 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 ZNF174Q15697 407 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 XKR9Q5GH70 373 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 BRAPQ7Z569 592 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 FAM178BQ8IXR5 827 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 C4orf19Q8IY42 314 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 THNSL1Q8IYQ7 743 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 MTMR9Q96QG7 549 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 TMEM117Q9H0C3 514 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 ELAC1Q9H777 363 aaKnown RBP18.32■□□□□ 0.52
COLCA2-206ENST00000638573 TTC12Q9H892 705 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-206ENST00000638573 COL4A3BPQ9Y5P4 624 aa18.32■□□□□ 0.52
COLCA2-206ENST00000638573 FNDC1Q4ZHG4 1894 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-206ENST00000638573 PLXNA4Q9HCM2 1894 aa18.31■□□□□ 0.52
COLCA2-206ENST00000638573 A0A0U1RQF3 1178 aa18.31■□□□□ 0.52
COLCA2-206ENST00000638573 FAM86C2PA6NEL3 165 aa18.31■□□□□ 0.52
COLCA2-206ENST00000638573 STX6O43752 255 aa18.31■□□□□ 0.52
COLCA2-206ENST00000638573 DNM2P50570 870 aa18.31■□□□□ 0.52
COLCA2-206ENST00000638573 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
COLCA2-206ENST00000638573 LAMTOR4Q0VGL1 99 aa18.31■□□□□ 0.52
COLCA2-206ENST00000638573 PIGOQ8TEQ8 1089 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms