RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 GCOM2Q9BZD3 368 aaPredicted RBP16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 NSUN3Q9H649 340 aaKnown RBP16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 ELAC1Q9H777 363 aaKnown RBP16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 MINDY3Q9H8M7 445 aa16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 TYW1Q9NV66 732 aaKnown RBP16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
KCNMA1-229ENST00000638249 DKC1O60832 514 aaKnown RBP eCLIP16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 LYPLA2O95372 231 aa16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 KCNA5P22460 613 aa16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 DNM2P50570 870 aa16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 SAFBQ15424 915 aaKnown RBP eCLIP16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 XKR9Q5GH70 373 aa16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 FAM43BQ6ZT52 329 aaPredicted RBP16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 PRPF31Q8WWY3 499 aaKnown RBP16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 LMAN2LQ9H0V9 348 aa16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 FOXP1Q9H334 677 aaPredicted RBP16.52■□□□□ 0.24
KCNMA1-229ENST00000638249 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 SPATA31C1P0DKV0 1188 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 ZSCAN20P17040 1043 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 PBX3P40426 434 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 RFC5P40937 340 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 HYAL1Q12794 435 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 ZNF174Q15697 407 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 AAK1Q2M2I8 961 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 ADGRD2Q7Z7M1 963 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 FAM184AQ8NB25 1140 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 COLGALT1Q8NBJ5 622 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 POF1BQ8WVV4 589 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 PIN4Q9Y237 131 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 A0A0U1RQF3 1178 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 H3BQ06 376 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 MED24O75448 989 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 LTBRP36941 435 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 TOB1P50616 345 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 LAMTOR4Q0VGL1 99 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 C4orf32Q8N8J7 132 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 PSPC1Q8WXF1 523 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 TMX3Q96JJ7 454 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
KCNMA1-229ENST00000638249 LINC01565O15544 149 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 SRGAP2CP0DJJ0 459 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 PHKA2P46019 1235 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 RARRES1P49788 294 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 DLX2Q07687 328 aaPredicted RBP16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 LONRF3Q496Y0 759 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 NAALADL2Q58DX5 795 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 TTC38Q5R3I4 469 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 OTUD6AQ7L8S5 288 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 IL27Q8NEV9 243 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 HELQQ8TDG4 1101 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 ASAP3Q8TDY4 903 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 LPPQ93052 612 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 PABPC5Q96DU9 382 aaKnown RBP16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 MTRQ99707 1265 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
KCNMA1-229ENST00000638249 TBX10O75333 385 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 FGF18O76093 207 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 IL9P15248 144 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 CTC1Q2NKJ3 1217 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 SPOUT1Q5T280 376 aaKnown RBP16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 TWF2Q6IBS0 349 aaKnown RBP16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 POTEGQ6S5H5 508 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 LRRC43Q8N309 656 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 RNF149Q8NC42 400 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 TRAIPQ9BWF2 469 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 CHST12Q9NRB3 414 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 ANKEF1Q9NU02 776 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 CLDND1Q9NY35 253 aa16.49■□□□□ 0.23
KCNMA1-229ENST00000638249 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 ST18O60284 1047 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 TECP42680 631 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 CAPSQ13938 189 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 ECM1Q16610 540 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 UBXN11Q5T124 520 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 CD320Q9NPF0 282 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 GPRC5CQ9NQ84 441 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 FAM105AQ9NUU6 356 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
KCNMA1-229ENST00000638249 HOXA2O43364 376 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms