RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 ABHD10Q9NUJ1 306 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 SUCLA2Q9P2R7 463 aaPredicted RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 GAKO14976 1311 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 P4HA2O15460 535 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 IL18RAPO95256 599 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 ECEL1O95672 775 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 RGS2P41220 211 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 TTC13Q8NBP0 860 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 GPBP1L1Q9HC44 474 aaPredicted RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 KBTBD13C9JR72 458 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 CD58P19256 250 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 CTNNA1P35221 906 aaKnown RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 RWDD2BP57060 319 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 USP50Q70EL3 339 aaPredicted RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 RIOX1Q9H6W3 641 aa9.41□□□□□ -0.9
PCDH15-233ENST00000621708 CPSF3Q9UKF6 684 aaKnown RBP9.41□□□□□ -0.9
PCDH15-233ENST00000621708 GOLGA8SH3BPF8 625 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 CTDNEP1O95476 244 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ALDH1A1P00352 501 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 SREBF1P36956 1147 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 GPC5P78333 572 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 CNPY4Q8N129 248 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 FBXL13Q8NEE6 735 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ASNSD1Q9NWL6 643 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ZNF142P52746 1687 aaPredicted RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 SART1O43290 800 aaKnown RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 VIMP08670 466 aaKnown RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 CYFIP1Q7L576 1253 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 METTL16Q86W50 562 aaKnown RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 MED4Q9NPJ6 270 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 PP2D1A8MPX8 630 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 F8W8V4 182 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 NKRFO15226 690 aaKnown RBP eCLIP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ATP1A3P13637 1013 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 EMC2Q15006 297 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ACAP3Q96P50 834 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 PRMT7Q9NVM4 692 aaPredicted RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 PYCARDQ9ULZ3 195 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 SYNGAP1Q96PV0 1343 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 GCLMP48507 274 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 SLC26A2P50443 739 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 COG7P83436 770 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 IFRD2Q12894 506 aaPredicted RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 TFDP2Q14188 446 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 DGKDQ16760 1214 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 Q4G0T1 1027 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 EFCAB13Q8IY85 973 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 DNERQ8NFT8 737 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 MTIF3Q9H2K0 278 aaKnown RBP9.4□□□□□ -0.9
PCDH15-233ENST00000621708 ADAM22Q9P0K1 906 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 TTLL3Q9Y4R7 772 aa9.4□□□□□ -0.9
PCDH15-233ENST00000621708 IGSF9BQ9UPX0 1349 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 TRIM49BA6NDI0 452 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 VEGFAP15692 232 aaPredicted RBP9.4□□□□□ -0.91
PCDH15-233ENST00000621708 GLE1Q53GS7 698 aaKnown RBP9.4□□□□□ -0.91
PCDH15-233ENST00000621708 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 KCTD6Q8NC69 237 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 GBA2Q9HCG7 927 aaPredicted RBP9.4□□□□□ -0.91
PCDH15-233ENST00000621708 NALCNQ8IZF0 1738 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 NRXN3Q9Y4C0 1643 aa9.4□□□□□ -0.91
PCDH15-233ENST00000621708 SOWAHDA6NJG2 315 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 EPHB4P54760 987 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 NFIAQ12857 509 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 ANKRD13CQ8N6S4 541 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 KPNA6O60684 536 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 GMNNO75496 209 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 HPDP32754 393 aaPredicted RBP9.39□□□□□ -0.91
PCDH15-233ENST00000621708 GOLGA8FQ08AF8 430 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 GOLGA8DPQ0D2H9 430 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 NIPA1Q7RTP0 329 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 RNF149Q8NC42 400 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 TNIP3Q96KP6 325 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 STAP1Q9ULZ2 295 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 SLC8A2Q9UPR5 921 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 TRAPPC3O43617 180 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 CHGBP05060 677 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 PRKCEQ02156 737 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 SLMAPQ14BN4 828 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 PLEKHH3Q7Z736 793 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 CCDC68Q9H2F9 335 aa9.39□□□□□ -0.91
PCDH15-233ENST00000621708 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.39□□□□□ -0.91
PCDH15-233ENST00000621708 CHD2O14647 1828 aaKnown RBP9.39□□□□□ -0.91
PCDH15-233ENST00000621708 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
PCDH15-233ENST00000621708 RARBP10826 455 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms