RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 NBR1Q14596 966 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 NAALADL2Q58DX5 795 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 FAM102BQ5T8I3 360 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 MCTP1Q6DN14 999 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 ERMNQ8TAM6 284 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 PIGOQ8TEQ8 1089 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 NACC1Q96RE7 527 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 MTRQ99707 1265 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 C11orf84Q9BUA3 381 aaPredicted RBP21.51■■□□□ 1.03
TCF3-219ENST00000610756 THEGQ9P2T0 379 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 MRPL42Q9Y6G3 142 aaKnown RBP21.51■■□□□ 1.03
TCF3-219ENST00000610756 LAD1O00515 517 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 MED24O75448 989 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 EOMESO95936 686 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 SRGAP2CP0DJJ0 459 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 MUTP22033 750 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 GATMP50440 423 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 POU5F1BQ06416 359 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 CUL4AQ13619 759 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 RILPL1Q5EBL4 403 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 LARP1BQ659C4 914 aaKnown RBP21.5■■□□□ 1.03
TCF3-219ENST00000610756 SRGAP1Q7Z6B7 1085 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 FERMT3Q86UX7 667 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 ECHDC2Q86YB7 292 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 P2RX5Q93086 422 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 XPNPEP1Q9NQW7 623 aa21.5■■□□□ 1.03
TCF3-219ENST00000610756 DBR1Q9UK59 544 aaKnown RBP21.5■■□□□ 1.03
TCF3-219ENST00000610756 DLL1O00548 723 aa21.49■■□□□ 1.03
TCF3-219ENST00000610756 HOXA2O43364 376 aa21.49■■□□□ 1.03
TCF3-219ENST00000610756 IBSPP21815 317 aaPredicted RBP21.49■■□□□ 1.03
TCF3-219ENST00000610756 MRPS5P82675 430 aaKnown RBP21.49■■□□□ 1.03
TCF3-219ENST00000610756 SKIV2LQ15477 1246 aaKnown RBP21.49■■□□□ 1.03
TCF3-219ENST00000610756 PAN2Q504Q3 1202 aaKnown RBP21.49■■□□□ 1.03
TCF3-219ENST00000610756 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.49■■□□□ 1.03
TCF3-219ENST00000610756 BMP2KQ9NSY1 1161 aaPredicted RBP21.49■■□□□ 1.03
TCF3-219ENST00000610756 COG5Q9UP83 839 aa21.49■■□□□ 1.03
TCF3-219ENST00000610756 STK24Q9Y6E0 443 aa21.49■■□□□ 1.03
TCF3-219ENST00000610756 A0A087WWV3 80 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 TBKBP1A7MCY6 615 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 ARL2P36404 184 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 CATSPER4Q7RTX7 472 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 IGSF22Q8N9C0 903 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 CCDC43Q96MW1 224 aaKnown RBP21.48■■□□□ 1.03
TCF3-219ENST00000610756 ASB2Q96Q27 587 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 TMEM117Q9H0C3 514 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 LMAN2LQ9H0V9 348 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 LRWD1Q9UFC0 647 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 PLAGL2Q9UPG8 496 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
TCF3-219ENST00000610756 FGFR1P11362 822 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 SKIP12755 728 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 PRPHP41219 470 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 PCBP1Q15365 356 aaKnown RBP eCLIP21.47■■□□□ 1.038e-8■■■■□ 25.5
TCF3-219ENST00000610756 HAUS3Q68CZ6 603 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 ZNF598Q86UK7 904 aaKnown RBP21.47■■□□□ 1.03
TCF3-219ENST00000610756 RNF149Q8NC42 400 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 HLA-CQ95604 372 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 RAB34Q9BZG1 259 aa21.47■■□□□ 1.03
TCF3-219ENST00000610756 TYW1Q9NV66 732 aaKnown RBP21.47■■□□□ 1.03
TCF3-219ENST00000610756 GRM6O15303 877 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 PHKA2P46019 1235 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 TJAP1Q5JTD0 557 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 IFNLR1Q8IU57 520 aaPredicted RBP21.46■■□□□ 1.03
TCF3-219ENST00000610756 SYMPKQ92797 1274 aaKnown RBP21.46■■□□□ 1.03
TCF3-219ENST00000610756 CASD1Q96PB1 797 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 MINDY3Q9H8M7 445 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 AAASQ9NRG9 546 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 RNF19AQ9NV58 838 aa21.46■■□□□ 1.03
TCF3-219ENST00000610756 PIN4Q9Y237 131 aaKnown RBP21.46■■□□□ 1.03
TCF3-219ENST00000610756 ZNF623O75123 536 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 HOXA11P31270 313 aaPredicted RBP21.45■■□□□ 1.02
TCF3-219ENST00000610756 PTENP60484 403 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 TFDP1Q14186 410 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 AAK1Q2M2I8 961 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 TWF2Q6IBS0 349 aaKnown RBP21.45■■□□□ 1.02
TCF3-219ENST00000610756 POTEGQ6S5H5 508 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 DTHD1Q6ZMT9 781 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 KLHL23Q8NBE8 558 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 COL25A1Q9BXS0 654 aaPredicted RBP21.45■■□□□ 1.02
TCF3-219ENST00000610756 NFKBIZQ9BYH8 718 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 AGPAT5Q9NUQ2 364 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 PCDHB12Q9Y5F1 795 aa21.45■■□□□ 1.02
TCF3-219ENST00000610756 ATF7P17544 494 aaPredicted RBP21.44■■□□□ 1.02
TCF3-219ENST00000610756 CCT6AP40227 531 aaKnown RBP21.44■■□□□ 1.02
TCF3-219ENST00000610756 IL17AQ16552 155 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 ECM1Q16610 540 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 TIGD5Q53EQ6 642 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 ABI1Q8IZP0 508 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 MCPH1Q8NEM0 835 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 SPPL3Q8TCT6 385 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 RSPH1Q8WYR4 309 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 CWH43Q9H720 699 aa21.44■■□□□ 1.02
TCF3-219ENST00000610756 ALG13Q9NP73 1137 aaKnown RBP21.44■■□□□ 1.02
TCF3-219ENST00000610756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.43■■□□□ 1.02
TCF3-219ENST00000610756 USO1O60763 962 aaKnown RBP21.43■■□□□ 1.02
TCF3-219ENST00000610756 ITGB1P05556 798 aa21.43■■□□□ 1.02
TCF3-219ENST00000610756 GLRA2P23416 452 aa21.43■■□□□ 1.02
TCF3-219ENST00000610756 RAB27AP51159 221 aa21.43■■□□□ 1.02
TCF3-219ENST00000610756 ATP2C1P98194 919 aaPredicted RBP21.43■■□□□ 1.02
TCF3-219ENST00000610756 CAMK1Q14012 370 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms