RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CCL23P55773 120 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 BEX3Q00994 111 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 TFAP4Q01664 338 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 CNTN2Q02246 1040 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 TMEM67Q5HYA8 995 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 RCSD1Q6JBY9 416 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 CXCL17Q6UXB2 119 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 TLK2Q86UE8 772 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 IFNL3Q8IZI9 196 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 FAM133AQ8N9E0 248 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 TMEM102Q8N9M5 508 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-220ENST00000589351 NXPE3Q969Y0 559 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 FAM122AQ96E09 287 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 NAPBQ9H115 298 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 VTA1Q9NP79 307 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 RNF146Q9NTX7 359 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 CXXC1Q9P0U4 656 aaPredicted RBP6.55□□□□□ -1.36
DNMT1-220ENST00000589351 STX8Q9UNK0 236 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 IGKV6D-41A0A0C4DH26 115 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 TSPY2A6NKD2 308 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 SMIM22K7EJ46 135 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 ERC2O15083 957 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 NKRFO15226 690 aaKnown RBP eCLIP6.54□□□□□ -1.36
DNMT1-220ENST00000589351 GPAA1O43292 621 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 B4GALT4O60513 344 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 PRDM1O75626 825 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 ATG7O95352 703 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 NFICP08651 508 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 ATP2A2P16615 1042 aaKnown RBP6.54□□□□□ -1.36
DNMT1-220ENST00000589351 MCCP23508 829 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 VAMP1P23763 118 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 RFC2P35250 354 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 BFSP2Q13515 415 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 PKN1Q16512 942 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 NSMFQ6X4W1 530 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 SIRT2Q8IXJ6 389 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
DNMT1-220ENST00000589351 PHOSPHO2Q8TCD6 241 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 BSNDQ8WZ55 320 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 YIPF2Q9BWQ6 316 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 TRPV6Q9H1D0 765 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 A1CFQ9NQ94 594 aaKnown RBP6.54□□□□□ -1.36
DNMT1-220ENST00000589351 COG5Q9UP83 839 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 MYH7P12883 1935 aa6.54□□□□□ -1.36
DNMT1-220ENST00000589351 MYH4Q9Y623 1939 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 ADCY6O43306 1168 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 MYL3P08590 195 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 POU3F3P20264 500 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 KCNJ6P48051 423 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 PTPN11Q06124 597 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 PPARAQ07869 468 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 DUSP28Q4G0W2 176 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 FAM47CQ5HY64 1035 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 EEPD1Q7L9B9 569 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 FAM168AQ92567 244 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 OSBP2Q969R2 916 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 MTG1Q9BT17 334 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 WDR11Q9BZH6 1224 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 FTOQ9C0B1 505 aaKnown RBP eCLIP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 KATNBL1Q9H079 304 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 ALDH8A1Q9H2A2 487 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 CYP39A1Q9NYL5 469 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 CCPG1Q9ULG6 757 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 YBX2Q9Y2T7 364 aaKnown RBP6.53□□□□□ -1.36
DNMT1-220ENST00000589351 ACTL7BQ9Y614 415 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 EYSQ5T1H1 3165 aa6.53□□□□□ -1.36
DNMT1-220ENST00000589351 TNKSO95271 1327 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PRUNE2Q8WUY3 3088 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PTPDC1A2A3K4 754 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 CTAGE5O15320 804 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 RANBP6O60518 1105 aaKnown RBP6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PARNO95453 639 aaKnown RBP6.52□□□□□ -1.37
DNMT1-220ENST00000589351 CHGBP05060 677 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 ICAM1P05362 532 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PLA2G5P39877 138 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 RABGGTBP53611 331 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PSMC6P62333 389 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 CYP27A1Q02318 531 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 BNIP3Q12983 259 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 CCDC96Q2M329 555 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PHLDB3Q6NSJ2 640 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 TAPT1Q6NXT6 567 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 DPH6Q7L8W6 267 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 DEFB128Q7Z7B8 93 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 ATG4DQ86TL0 474 aaPredicted RBP6.52□□□□□ -1.37
DNMT1-220ENST00000589351 ATCAYQ86WG3 371 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 GLIS3Q8NEA6 775 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 OR6J1Q8NGC5 347 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 DCAF4Q8WV16 495 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 SCLYQ96I15 445 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms