RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 C6orf203Q9P0P8 240 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 ACAD8Q9UKU7 415 aa6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 TMCC3Q9ULS5 477 aa6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 ATP11BQ9Y2G3 1177 aa6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 NFASCO94856 1347 aa6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 EMSYQ7Z589 1322 aa6.73□□□□□ -1.33
PPP4R1-223ENST00000582933 TRIOBPQ9H2D6 2365 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 CYP3A7-CYP3A51PA0A087WV96 503 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 DCDC2CA8MYV0 355 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 GOLGA6L19H0YKK7 550 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ARVCFO00192 962 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 HAS3O00219 553 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 EDIL3O43854 480 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TDP2O95551 362 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 LGALS2P05162 132 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 CLTBP09497 229 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ARP10275 920 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 CYP3A7P24462 503 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TCF7P36402 384 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ZNF76P36508 570 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 IGBP1P78318 339 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 SP4Q02446 784 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 NSUN2Q08J23 767 aaKnown RBP eCLIP6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 NR5A1Q13285 461 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 CAMK2BQ13554 666 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 CUL4AQ13619 759 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 SAFBQ15424 915 aaKnown RBP eCLIP6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 Q4G0T1 1027 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 NFRKBQ6P4R8 1299 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 SYT10Q6XYQ8 523 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 PIK3AP1Q6ZUJ8 805 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 KRT77Q7Z794 578 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 NEK8Q86SG6 692 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TRIM50Q86XT4 487 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TRIML1Q8N9V2 468 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 DDX12PQ92771 950 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 KAT2BQ92831 832 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 NACC2Q96BF6 587 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 PDLIM2Q96JY6 352 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 SCLT1Q96NL6 688 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ZNF577Q9BSK1 485 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 C16orf70Q9BSU1 422 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 BCAS3Q9H6U6 928 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 HOMER3Q9NSC5 361 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ZNF446Q9NWS9 450 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 SLC9A2Q9UBY0 812 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ZMAT5Q9UDW3 170 aaKnown RBP6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TCEAL9Q9UHQ7 104 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 TBX21Q9UL17 535 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ZNF215Q9UL58 517 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 MAFFQ9ULX9 164 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 N6AMT1Q9Y5N5 214 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 V9GYY5 206 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 KIAA1217Q5T5P2 1943 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 ALPK3Q96L96 1907 aa6.72□□□□□ -1.33
PPP4R1-223ENST00000582933 SCN10AQ9Y5Y9 1956 aa6.71□□□□□ -1.33
PPP4R1-223ENST00000582933 hCG_2014768A0A024R1R8 64 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 FAM205CA6NFA0 338 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 FAM25EA8MYX2 175 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 BTBD18B2RXH4 712 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 H3BRB1 525 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 K7ELQ4 463 aaPredicted RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 KIAA0355O15063 1070 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 MSH4O15457 936 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 DHX15O43143 795 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 SLC37A4O43826 429 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 B4GALT4O60513 344 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 LGR5O75473 907 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 MTRF1O75570 445 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 KIAA0754O94854 1291 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 CCNE2O96020 404 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 CD4P01730 458 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 CD53P19397 219 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 HOXC8P31273 242 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 PSEN2P49810 448 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 ACTR2P61160 394 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 KRT76Q01546 638 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 GUCY1B3Q02153 619 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 PTPN11Q06124 597 aaPredicted RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 FAAP100Q0VG06 881 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 ZRSR1Q15695 479 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 SEPT7Q16181 437 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 LETM2Q2VYF4 491 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 EARS2Q5JPH6 523 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 PPP4R3AQ6IN85 833 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 ZNF746Q6NUN9 644 aaPredicted RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 KIAA1328Q86T90 577 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 PACS2Q86VP3 889 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 SPATS2Q86XZ4 545 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 NDUFAF2Q8N183 169 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 CHCHD4Q8N4Q1 142 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 GABPB2Q8TAK5 448 aaPredicted RBP6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 ETNPPLQ8TBG4 499 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 SNX21Q969T3 373 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 JAKMIP2Q96AA8 810 aa6.71□□□□□ -1.34
PPP4R1-223ENST00000582933 VMP1Q96GC9 406 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms