RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 NLRC5Q86WI3 1866 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 TRANK1O15050 2925 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 ASAP2O43150 1006 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 GAS2O43903 313 aaKnown RBP18.52■□□□□ 0.56
SREBF1-219ENST00000580540 DGAT1O75907 488 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
SREBF1-219ENST00000580540 MAEAQ7L5Y9 396 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 FERMT3Q86UX7 667 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 ECHDC2Q86YB7 292 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 ABI1Q8IZP0 508 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 C4orf32Q8N8J7 132 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 RNF149Q8NC42 400 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 MRPL38Q96DV4 380 aaKnown RBP18.52■□□□□ 0.56
SREBF1-219ENST00000580540 ELAC1Q9H777 363 aaKnown RBP18.52■□□□□ 0.56
SREBF1-219ENST00000580540 IFT122Q9HBG6 1241 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 XPNPEP1Q9NQW7 623 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 LRWD1Q9UFC0 647 aa18.52■□□□□ 0.56
SREBF1-219ENST00000580540 COL4A6Q14031 1691 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 GRM6O15303 877 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 USO1O60763 962 aaKnown RBP18.51■□□□□ 0.55
SREBF1-219ENST00000580540 LINC00271P0C7V0 271 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.55
SREBF1-219ENST00000580540 CCT6AP40227 531 aaKnown RBP18.51■□□□□ 0.55
SREBF1-219ENST00000580540 RARRES1P49788 294 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 TFF2Q03403 129 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 POTEGQ6S5H5 508 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 ATXN2LQ8WWM7 1075 aaKnown RBP18.51■□□□□ 0.55
SREBF1-219ENST00000580540 NACC1Q96RE7 527 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 POLR3CQ9BUI4 534 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-219ENST00000580540 ALG13Q9NP73 1137 aaKnown RBP18.51■□□□□ 0.55
SREBF1-219ENST00000580540 CHST12Q9NRB3 414 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 A0A0C4DFX4 3053 aa18.51■□□□□ 0.55
SREBF1-219ENST00000580540 UNC80Q8N2C7 3258 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 C5orf67F2Z3F1 127 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 HOXA2O43364 376 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 RPA1P27694 616 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 PHKA2P46019 1235 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 MRPS5P82675 430 aaKnown RBP18.5■□□□□ 0.55
SREBF1-219ENST00000580540 TFDP1Q14186 410 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 LONRF3Q496Y0 759 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 RILPL1Q5EBL4 403 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 HAUS3Q68CZ6 603 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 SRGAP1Q7Z6B7 1085 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 PLVAPQ9BX97 442 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 COL25A1Q9BXS0 654 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-219ENST00000580540 TMEM117Q9H0C3 514 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 MINDY3Q9H8M7 445 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 TYW1Q9NV66 732 aaKnown RBP18.5■□□□□ 0.55
SREBF1-219ENST00000580540 HCSTQ9UBK5 93 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 RALGAPA2Q2PPJ7 1873 aa18.5■□□□□ 0.55
SREBF1-219ENST00000580540 A0A0U1RQF3 1178 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 FXR2P51116 673 aaKnown RBP eCLIP18.49■□□□□ 0.55
SREBF1-219ENST00000580540 MXD4Q14582 209 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-219ENST00000580540 TIGD5Q53EQ6 642 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 TJAP1Q5JTD0 557 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 EP400NLQ6ZTU2 488 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 KLHL23Q8NBE8 558 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 ASAP3Q8TDY4 903 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 HLA-CQ95604 372 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 ASB2Q96Q27 587 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 RAB34Q9BZG1 259 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 POLR3FQ9H1D9 316 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-219ENST00000580540 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.49■□□□□ 0.55
SREBF1-219ENST00000580540 AAASQ9NRG9 546 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 PLAGL2Q9UPG8 496 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 PCDHB12Q9Y5F1 795 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 ARID2Q68CP9 1835 aa18.49■□□□□ 0.55
SREBF1-219ENST00000580540 ARHGEF35A5YM69 484 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 EOMESO95936 686 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 ARL2P36404 184 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 TCEAL5Q5H9L2 206 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 DTHD1Q6ZMT9 781 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 SNX29Q8TEQ0 813 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 LPPQ93052 612 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 CASD1Q96PB1 797 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 GPRC5CQ9NQ84 441 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 RNF19AQ9NV58 838 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 DBR1Q9UK59 544 aaKnown RBP18.48■□□□□ 0.55
SREBF1-219ENST00000580540 COG5Q9UP83 839 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 KIAA1024Q9UPX6 916 aa18.48■□□□□ 0.55
SREBF1-219ENST00000580540 MYO7AQ13402 2215 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 VPS37CA5D8V6 355 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-219ENST00000580540 PP2D1A8MPX8 630 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 INO80B-WBP1J3KQ70 363 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 LAD1O00515 517 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 ERLIN2O94905 339 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 ITGB1P05556 798 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 CUL4AQ13619 759 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 PDIA5Q14554 519 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 ZRSR1Q15695 479 aaKnown RBP18.47■□□□□ 0.55
SREBF1-219ENST00000580540 ECM1Q16610 540 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 CLLU1OSQ5K130 101 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 PADI6Q6TGC4 694 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 ZNF598Q86UK7 904 aaKnown RBP18.47■□□□□ 0.55
SREBF1-219ENST00000580540 THNSL1Q8IYQ7 743 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 SYMPKQ92797 1274 aaKnown RBP18.47■□□□□ 0.55
SREBF1-219ENST00000580540 P2RX5Q93086 422 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms