RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
ERBB2-206ENST00000578373 TTI2Q6NXR4 508 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 SULF1Q8IWU6 871 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 NLRP4Q96MN2 994 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 EHD4Q9H223 541 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 MTMR1Q13613 665 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 C2CD6Q53TS8 623 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 RFX8Q6ZV50 586 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 ARHGAP24Q8N264 748 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 TTC17Q96AE7 1141 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 C9orf72Q96LT7 481 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 PRDM4Q9UKN5 801 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 MEGF6O75095 1541 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 ZNF233A6NK53 670 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 PLS3P13797 630 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 PRELPP51888 382 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 Q3C1V9 767 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 RAB3IPQ96QF0 476 aaPredicted RBP12.92□□□□□ -0.34
ERBB2-206ENST00000578373 NGRNQ9NPE2 291 aaKnown RBP12.92□□□□□ -0.34
ERBB2-206ENST00000578373 MAD2L2Q9UI95 211 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 SALL1Q9NSC2 1324 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 EIF3HO15372 352 aaKnown RBP eCLIP12.91□□□□□ -0.345e-7■■□□□ 11.5
ERBB2-206ENST00000578373 OPHN1O60890 802 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 MT-ND3P03897 115 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 LSP1P33241 339 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 PYROXD1Q8WU10 500 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 FAM20AQ96MK3 541 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 CYTH2Q99418 400 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 ARHGAP20Q9P2F6 1191 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 MDH1P40925 334 aaKnown RBP12.91□□□□□ -0.34
ERBB2-206ENST00000578373 ADCY2Q08462 1091 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-206ENST00000578373 CCNYQ8ND76 341 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 RFFLQ8WZ73 363 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 SEMA6BQ9H3T3 888 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 HESX1Q9UBX0 185 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 HSPA6P17066 643 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 SOX5P35711 763 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 PDIA5Q14554 519 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 TAF11Q15544 211 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 DARS2Q6PI48 645 aaKnown RBP12.91□□□□□ -0.34
ERBB2-206ENST00000578373 TRAPPC11Q7Z392 1133 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 TBC1D16Q8TBP0 767 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 ATP2A3Q93084 1043 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 TCHHQ07283 1943 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 KDM6AO15550 1401 aaPredicted RBP12.91□□□□□ -0.34
ERBB2-206ENST00000578373 GOLGA8RI6L899 631 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 CAPN9O14815 690 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
ERBB2-206ENST00000578373 NDUFB10O96000 172 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 CASP4P49662 377 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 TNFAIP1Q13829 316 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 SBK1Q52WX2 424 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 RASIP1Q5U651 963 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 MAML1Q92585 1016 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 HSPH1Q92598 858 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
ERBB2-206ENST00000578373 CLDN3O15551 220 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 SERPINB6P35237 376 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 GRB10Q13322 594 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 LONRF1Q17RB8 773 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.34
ERBB2-206ENST00000578373 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 PODXLO00592 558 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 CHUKO15111 745 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.34
ERBB2-206ENST00000578373 KIF22Q14807 665 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 TMCO4Q5TGY1 634 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 KCTD6Q8NC69 237 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 BBOF1Q8ND07 529 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 DDX23Q9BUQ8 820 aaKnown RBP12.9□□□□□ -0.34
ERBB2-206ENST00000578373 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 MRPL47Q9HD33 250 aaKnown RBP12.9□□□□□ -0.34
ERBB2-206ENST00000578373 HAUS2Q9NVX0 235 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 SYNGAP1Q96PV0 1343 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 DIP2BQ9P265 1576 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 PPP2R5AQ15172 486 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 RSRC2Q7L4I2 434 aaKnown RBP12.9□□□□□ -0.34
ERBB2-206ENST00000578373 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 VCXQ9H320 206 aa12.9□□□□□ -0.34
ERBB2-206ENST00000578373 ACTR5Q9H9F9 607 aaPredicted RBP12.9□□□□□ -0.34
ERBB2-206ENST00000578373 WNT7AO00755 349 aa12.89□□□□□ -0.35
ERBB2-206ENST00000578373 FGFR2P21802 821 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms