RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 CCT6AP40227 531 aaKnown RBP29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 PAN2Q504Q3 1202 aaKnown RBP29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 IGSF22Q8N9C0 903 aa29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 INTS4Q96HW7 963 aaKnown RBP29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 RAB34Q9BZG1 259 aa29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 TMEM161AQ9NX61 479 aa29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 DBR1Q9UK59 544 aaKnown RBP29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 COL4A4P53420 1690 aaPredicted RBP29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 PDCP20941 246 aa29.38■■■□□ 2.29
PPP4R1-204ENST00000577393 ECM1Q16610 540 aa29.38■■■□□ 2.29
PPP4R1-204ENST00000577393 DTHD1Q6ZMT9 781 aa29.38■■■□□ 2.29
PPP4R1-204ENST00000577393 RNF149Q8NC42 400 aa29.38■■■□□ 2.29
PPP4R1-204ENST00000577393 CLP1Q92989 425 aaKnown RBP29.38■■■□□ 2.29
PPP4R1-204ENST00000577393 ELAC1Q9H777 363 aaKnown RBP29.38■■■□□ 2.29
PPP4R1-204ENST00000577393 VPS37CA5D8V6 355 aaPredicted RBP29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 USO1O60763 962 aaKnown RBP29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 MUTP22033 750 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 ATP2C1P98194 919 aaPredicted RBP29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 FAM102BQ5T8I3 360 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 CATSPER4Q7RTX7 472 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 SRGAP1Q7Z6B7 1085 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 CHST12Q9NRB3 414 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 FOXD4L1Q9NU39 408 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 LMCD1Q9NZU5 365 aa29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 MRPL42Q9Y6G3 142 aaKnown RBP29.37■■■□□ 2.29
PPP4R1-204ENST00000577393 NLRC5Q86WI3 1866 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 CTNNB1P35222 781 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 ARL2P36404 184 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 BMPR1AP36894 532 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 MXD4Q14582 209 aaPredicted RBP29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 BRAPQ7Z569 592 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 ECHDC2Q86YB7 292 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 SNX29Q8TEQ0 813 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 SNX21Q969T3 373 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 MINDY3Q9H8M7 445 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 DACT1Q9NYF0 836 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 RWDD3Q9Y3V2 267 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 STK24Q9Y6E0 443 aa29.36■■■□□ 2.29
PPP4R1-204ENST00000577393 PP2D1A8MPX8 630 aa29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 H3BNC9 293 aa29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 FGFR1P11362 822 aa29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 GPM6BQ13491 265 aa29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 ASAP3Q8TDY4 903 aa29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 PRDM6Q9NQX0 595 aa29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 PIN4Q9Y237 131 aaKnown RBP29.35■■■□□ 2.29
PPP4R1-204ENST00000577393 UNC80Q8N2C7 3258 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 RALGAPA2Q2PPJ7 1873 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 A0A0U1RQF3 1178 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 TBKBP1A7MCY6 615 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 C5orf67F2Z3F1 127 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 RB1P06400 928 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 MAEAQ7L5Y9 396 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 POLR3FQ9H1D9 316 aaPredicted RBP29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 KIAA1024Q9UPX6 916 aa29.34■■■□□ 2.29
PPP4R1-204ENST00000577393 ARHGEF35A5YM69 484 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 SYT1P21579 422 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 GLRA2P23416 452 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 CDC25AP30304 524 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 PHKA2P46019 1235 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 TFDP1Q14186 410 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 KRT79Q5XKE5 535 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 GPRC5CQ9NQ84 441 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 RNF19AQ9NV58 838 aa29.33■■■□□ 2.29
PPP4R1-204ENST00000577393 REV3LO60673 3130 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 FNDC1Q4ZHG4 1894 aaPredicted RBP29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 PTENP60484 403 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 CAPSQ13938 189 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 TWF2Q6IBS0 349 aaKnown RBP29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 PADI6Q6TGC4 694 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 RNF169Q8NCN4 708 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 MCPH1Q8NEM0 835 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 AGPAT5Q9NUQ2 364 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 DDX19AQ9NUU7 478 aaKnown RBP29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 A0A0C4DFX4 3053 aa29.32■■■□□ 2.28
PPP4R1-204ENST00000577393 POU5F1BQ06416 359 aa29.31■■■□□ 2.28
PPP4R1-204ENST00000577393 ARL6IP4Q66PJ3 421 aaKnown RBP29.31■■■□□ 2.28
PPP4R1-204ENST00000577393 ZNF598Q86UK7 904 aaKnown RBP29.31■■■□□ 2.28
PPP4R1-204ENST00000577393 MMTAG2Q9BU76 263 aaKnown RBP29.31■■■□□ 2.28
PPP4R1-204ENST00000577393 C11orf84Q9BUA3 381 aaPredicted RBP29.31■■■□□ 2.28
PPP4R1-204ENST00000577393 TRAIPQ9BWF2 469 aa29.31■■■□□ 2.28
PPP4R1-204ENST00000577393 VWA3AA6NCI4 1184 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 HOXA2O43364 376 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 EOMESO95936 686 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 ATF7P17544 494 aaPredicted RBP29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 CYP11B2P19099 503 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 IFNLR1Q8IU57 520 aaPredicted RBP29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 MRPL38Q96DV4 380 aaKnown RBP29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 CASD1Q96PB1 797 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 PLVAPQ9BX97 442 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 TMEM117Q9H0C3 514 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 BHMT2Q9H2M3 363 aa29.3■■■□□ 2.28
PPP4R1-204ENST00000577393 SKIV2LQ15477 1246 aaKnown RBP29.29■■■□□ 2.28
PPP4R1-204ENST00000577393 PTPROQ16827 1216 aa29.29■■■□□ 2.28
PPP4R1-204ENST00000577393 TYW1Q9NV66 732 aaKnown RBP29.29■■■□□ 2.28
PPP4R1-204ENST00000577393 INO80B-WBP1J3KQ70 363 aa29.28■■■□□ 2.28
PPP4R1-204ENST00000577393 SKIP12755 728 aa29.28■■■□□ 2.28
PPP4R1-204ENST00000577393 HOXA11P31270 313 aaPredicted RBP29.28■■■□□ 2.28
PPP4R1-204ENST00000577393 CLLU1OSQ5K130 101 aa29.28■■■□□ 2.28
PPP4R1-204ENST00000577393 SPOUT1Q5T280 376 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms