RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 MKL1Q969V6 931 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 DEPDC7Q96QD5 511 aa4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 DNAJC2Q99543 621 aaKnown RBP4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 INO80BQ9C086 356 aaPredicted RBP4.75□□□□□ -1.65
HDGFL3-202ENST00000562702 GRID2IPA4D2P6 1211 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 GOLGA6L22H0YM25 854 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 DAPK3O43293 454 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 LAG3P18627 525 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 AVPR1BP47901 424 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SSRP1Q08945 709 aaKnown RBP4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 RASA3Q14644 834 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 DGKDQ16760 1214 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 YOD1Q5VVQ6 348 aaPredicted RBP4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 ELOA2Q8IYF1 753 aaPredicted RBP4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 MDGA1Q8NFP4 955 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 CPT1CQ8TCG5 803 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 NTN5Q8WTR8 489 aaPredicted RBP4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SRPK1Q96SB4 655 aaKnown RBP4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SPATA9Q9BWV2 254 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 OSBPL2Q9H1P3 480 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SMURF1Q9HCE7 757 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SNTG2Q9NY99 539 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 SORCS3Q9UPU3 1222 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 COX11Q9Y6N1 276 aa4.74□□□□□ -1.65
HDGFL3-202ENST00000562702 JUNP05412 331 aaKnown RBP4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 VSIG10L2P0DP72 767 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 NPEPPSP55786 919 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 GABREP78334 506 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 ACAP1Q15027 740 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 NFE2L2Q16236 605 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 DCAF17Q5H9S7 520 aaPredicted RBP4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 COLEC12Q5KU26 742 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 ZNF362Q5T0B9 420 aaPredicted RBP4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 NAIF1Q69YI7 327 aaPredicted RBP4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 SPATC1Q76KD6 591 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 PLA2G15Q8NCC3 412 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 ST8SIA2Q92186 375 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 ERCC4Q92889 916 aaPredicted RBP4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 ZNF512Q96ME7 567 aaPredicted RBP4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 PFDN2Q9UHV9 154 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 HS3ST4Q9Y661 456 aa4.73□□□□□ -1.65
HDGFL3-202ENST00000562702 SPATA31A6Q5VVP1 1343 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 C2orf78A6NCI8 922 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 TRIM24O15164 1050 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 SCAF4O95104 1147 aaKnown RBP4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 SDHAP31040 664 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 ALDH6A1Q02252 535 aaKnown RBP4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 TMEM132BQ14DG7 1078 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 BCL6BQ8N143 479 aaPredicted RBP4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 LCORLQ8N3X6 602 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 BEND2Q8NDZ0 799 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 FOXB1Q99853 325 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 NCDNQ9UBB6 729 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 SFMBT1Q9UHJ3 866 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 INSL6Q9Y581 213 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 COL4A3Q01955 1670 aa4.72□□□□□ -1.65
HDGFL3-202ENST00000562702 TRBV23-1A0A0A0MS06 115 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 TOX4O94842 621 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 ROM1Q03395 351 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 SEC23AQ15436 765 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 LONRF2Q1L5Z9 754 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 ZC3H12BQ5HYM0 836 aaKnown RBP4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 APBB1IPQ7Z5R6 666 aaPredicted RBP4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 NOSTRINQ8IVI9 506 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 CISD2Q8N5K1 135 aaKnown RBP4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 ZBTB38Q8NAP3 1195 aaPredicted RBP4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 WDR92Q96MX6 357 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 RSAD1Q9HA92 442 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 EIF2B4Q9UI10 523 aaKnown RBP4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 PCDHA9Q9Y5H5 950 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 KDM2BQ8NHM5 1336 aa4.71□□□□□ -1.66
HDGFL3-202ENST00000562702 SLC12A8A0AV02 714 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 FAM221BA6H8Z2 402 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 MAFGO15525 162 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 ADCY3O60266 1144 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 DIAPH1O60610 1272 aaKnown RBP4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 NR4A1P22736 598 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 ADAM8P78325 824 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 PAPD7Q5XG87 772 aaKnown RBP4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 IQSEC1Q6DN90 963 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 CMTM4Q8IZR5 234 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 OR5AN1Q8NGI8 311 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 SLC7A14Q8TBB6 771 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 MYEOVQ96EZ4 313 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 C14orf93Q9H972 538 aaKnown RBP4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 KCMF1Q9P0J7 381 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 SYNPO2Q9UMS6 1093 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 B3GALT1Q9Y5Z6 326 aa4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 POLR2AP24928 1970 aaKnown RBP4.7□□□□□ -1.66
HDGFL3-202ENST00000562702 GRXCR1A8MXD5 290 aa4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 CRTAMO95727 393 aa4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 RANGAP1P46060 587 aaPredicted RBP4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 ELLP55199 621 aaPredicted RBP4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 SPIDRQ14159 915 aa4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 BMS1Q14692 1282 aaKnown RBP4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 C1QL3Q5VWW1 255 aa4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 FBXO42Q6P3S6 717 aa4.69□□□□□ -1.66
HDGFL3-202ENST00000562702 Q6YL49 198 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms