RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 CYP4A11Q02928 519 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 UBE3AQ05086 875 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 ORC2Q13416 577 aaPredicted RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 CTTNQ14247 550 aaKnown RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 PUS10Q3MIT2 529 aaKnown RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 SPOUT1Q5T280 376 aaKnown RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 ZNF579Q8NAF0 562 aaKnown RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 FBXO18Q8NFZ0 1043 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 PSPC1Q8WXF1 523 aaKnown RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 RSPH1Q8WYR4 309 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 NLRP4Q96MN2 994 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 HSD17B14Q9BPX1 270 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 FOXP1Q9H334 677 aaPredicted RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 RNF19AQ9NV58 838 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 TYW1Q9NV66 732 aaKnown RBP20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 PLXNA4Q9HCM2 1894 aa20.11■□□□□ 0.81
TNFAIP2-206ENST00000560428 LAG3P18627 525 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 TXKP42681 527 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 GUCY1B3Q02153 619 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 EMC2Q15006 297 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 RABEP1Q15276 862 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 XKR9Q5GH70 373 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 ZNF598Q86UK7 904 aaKnown RBP20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 TPH2Q8IWU9 490 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 ABI1Q8IZP0 508 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 LRRC43Q8N309 656 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 COLGALT1Q8NBJ5 622 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 POF1BQ8WVV4 589 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 TCP11Q8WWU5 503 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 PPP2R3CQ969Q6 453 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 NECAB3Q96P71 396 aaPredicted RBP20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 CASD1Q96PB1 797 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 CWH43Q9H720 699 aa20.1■□□□□ 0.81
TNFAIP2-206ENST00000560428 ASAP2O43150 1006 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 CSDE1O75534 798 aaKnown RBP20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 SKIP12755 728 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 DNAJB1P25685 340 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 HYAL1Q12794 435 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 CTC1Q2NKJ3 1217 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 KSR1Q8IVT5 923 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 PRPF31Q8WWY3 499 aaKnown RBP20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 IFT122Q9HBG6 1241 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 ANKEF1Q9NU02 776 aa20.09■□□□□ 0.81
TNFAIP2-206ENST00000560428 MYO7AQ13402 2215 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 ATF7P17544 494 aaPredicted RBP20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 PHKA2P46019 1235 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 CATSPER4Q7RTX7 472 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 SRGAP1Q7Z6B7 1085 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 TMEM143Q96AN5 459 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 MTRQ99707 1265 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 TMEM60Q9H2L4 133 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 CLDND1Q9NY35 253 aa20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 PIN4Q9Y237 131 aaKnown RBP20.08■□□□□ 0.81
TNFAIP2-206ENST00000560428 ZBTB39O15060 712 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 FGF18O76093 207 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 MCM7P33993 719 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 RAB27AP51159 221 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 LAMTOR4Q0VGL1 99 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 CLLU1OSQ5K130 101 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 TWF2Q6IBS0 349 aaKnown RBP20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 PTCRAQ6ISU1 281 aaPredicted RBP20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 LRRC55Q6ZSA7 311 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 FERMT3Q86UX7 667 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 NOSTRINQ8IVI9 506 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 THNSL1Q8IYQ7 743 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 RNF169Q8NCN4 708 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 MRPL9Q9BYD2 267 aaKnown RBP20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 AGPAT5Q9NUQ2 364 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 HCSTQ9UBK5 93 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 LZTS1Q9Y250 596 aa20.07■□□□□ 0.8
TNFAIP2-206ENST00000560428 GRXCR2A6NFK2 248 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 POTEMA6NI47 508 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 H3BQ06 376 aaPredicted RBP20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 ST18O60284 1047 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 DGAT1O75907 488 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 ATP2B1P20020 1258 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 IRS1P35568 1242 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 PPM1AP35813 382 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 LTBRP36941 435 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 TRAPPC10P48553 1259 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 PLCB3Q01970 1234 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 MXD4Q14582 209 aaPredicted RBP20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 PDE12Q6L8Q7 609 aaKnown RBP20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 UPF2Q9HAU5 1272 aaKnown RBP20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 XPNPEP1Q9NQW7 623 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 TLR9Q9NR96 1032 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 FAM50BQ9Y247 325 aa20.06■□□□□ 0.8
TNFAIP2-206ENST00000560428 ZNF623O75123 536 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 CSPG5O95196 566 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 OR52Z1P0C646 297 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 SRGAP2CP0DJJ0 459 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 RARRES1P49788 294 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 POU5F1BQ06416 359 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 GNL2Q13823 731 aaKnown RBP20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 PCBP1Q15365 356 aaKnown RBP eCLIP20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 KCNT2Q6UVM3 1135 aa20.05■□□□□ 0.8
TNFAIP2-206ENST00000560428 EP400NLQ6ZTU2 488 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms