RNA–Protein interactions for RNA: ENST00000554891.5

HNRNPC-213, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-213ENST00000554891 LPPQ93052 612 aa11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 CEP170P1Q96L14 293 aa11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 LXNQ9BS40 222 aa11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 IFT122Q9HBG6 1241 aa11.89□□□□□ -0.51
HNRNPC-213ENST00000554891 A0A0U1RQF3 1178 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 PER2O15055 1255 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 MARCH6O60337 910 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 FGF18O76093 207 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 SLITRK3O94933 977 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 ATP2B1P20020 1258 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 NRIP1P48552 1158 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 NAALADL2Q58DX5 795 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 HELQQ8TDG4 1101 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 PRPF31Q8WWY3 499 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 NLRP4Q96MN2 994 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 GCOM2Q9BZD3 368 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 TMEM117Q9H0C3 514 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 MINDY3Q9H8M7 445 aa11.88□□□□□ -0.51
HNRNPC-213ENST00000554891 NT5C1B-RDH14C9J2C7 533 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 GLP2RO95838 553 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 SRGAP2CP0DJJ0 459 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 YWHABP31946 246 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 TXKP42681 527 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 DNM2P50570 870 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 TPH2Q8IWU9 490 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 THNSL1Q8IYQ7 743 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 MTMR9Q96QG7 549 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 EIF2AK1Q9BQI3 630 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 CLEC1BQ9P126 229 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 PCDHB12Q9Y5F1 795 aa11.87□□□□□ -0.51
HNRNPC-213ENST00000554891 MBTPS2O43462 519 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 COL9A1P20849 921 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 PHKA2P46019 1235 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 LAMTOR4Q0VGL1 99 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 CALCRLQ16602 461 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 KCNT2Q6UVM3 1135 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 GJD3Q8N144 294 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 VN1R2Q8NFZ6 395 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 MICAL1Q8TDZ2 1067 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 HSD17B14Q9BPX1 270 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 TTC12Q9H892 705 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 C11orf16Q9NQ32 467 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 PCDHA12Q9UN75 941 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 PIN4Q9Y237 131 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 COL4A3BPQ9Y5P4 624 aa11.86□□□□□ -0.51
HNRNPC-213ENST00000554891 FAM86C2PA6NEL3 165 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 POTEMA6NI47 508 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 HIDE1A8MVS5 230 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 FSCN2O14926 492 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 B4GALT3O60512 393 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 EOMESO95936 686 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 LAG3P18627 525 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 MCM7P33993 719 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 AFF1P51825 1210 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 POLGP54098 1239 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 EMC2Q15006 297 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 ZNF174Q15697 407 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 TWF2Q6IBS0 349 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 CATSPER4Q7RTX7 472 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 TMEM173Q86WV6 379 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 PIGOQ8TEQ8 1089 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 TLE6Q9H808 572 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 TLR9Q9NR96 1032 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 AAASQ9NRG9 546 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 FAM105AQ9NUU6 356 aa11.85□□□□□ -0.51
HNRNPC-213ENST00000554891 NCK2O43639 380 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 NEMFO60524 1076 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 SPATA31C1P0DKV0 1188 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.519e-7■■■□□ 16.4
HNRNPC-213ENST00000554891 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 NDUFV1P49821 464 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 CDC42EP1Q00587 391 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 PLCB3Q01970 1234 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 ZP2Q05996 745 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 TRIM29Q14134 588 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 NBR1Q14596 966 aa11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 SMAD2Q15796 467 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-213ENST00000554891 PUS10Q3MIT2 529 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms