RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 ZNF668Q96K58 619 aaPredicted RBP14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 CCDC43Q96MW1 224 aaKnown RBP14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 FDXACB1Q9BRP7 624 aaPredicted RBP14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 TRAIPQ9BWF2 469 aa14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 TMEM60Q9H2L4 133 aa14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 TUFT1Q9NNX1 390 aa14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 PCDHB12Q9Y5F1 795 aa14.68□□□□□ -0.06
HNRNPC-205ENST00000553300 MUC3AQ02505 3323 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 WNT7AO00755 349 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 OR52Z1P0C646 297 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 SKIP12755 728 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 EMC2Q15006 297 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 PCBP1Q15365 356 aaKnown RBP eCLIP14.67□□□□□ -0.063e-6■■■□□ 15.1
HNRNPC-205ENST00000553300 ZNF174Q15697 407 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 FAM102BQ5T8I3 360 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 PRPF31Q8WWY3 499 aaKnown RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 NLRP4Q96MN2 994 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 MTRQ99707 1265 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 POLR3CQ9BUI4 534 aaPredicted RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 TMEM117Q9H0C3 514 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 NSUN3Q9H649 340 aaKnown RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 IFT122Q9HBG6 1241 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 FNDC1Q4ZHG4 1894 aaPredicted RBP14.67□□□□□ -0.06
HNRNPC-205ENST00000553300 TBKBP1A7MCY6 615 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 LAD1O00515 517 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 MUTP22033 750 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 RAB27AP51159 221 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 POU5F1BQ06416 359 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 LAMTOR4Q0VGL1 99 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 CATSPER4Q7RTX7 472 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 FERMT3Q86UX7 667 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 ECHDC2Q86YB7 292 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 KSR1Q8IVT5 923 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 ABI1Q8IZP0 508 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 PPP2R3CQ969Q6 453 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 NACC1Q96RE7 527 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 RAB34Q9BZG1 259 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 PLAGL2Q9UPG8 496 aa14.66□□□□□ -0.06
HNRNPC-205ENST00000553300 MYO7AQ13402 2215 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 POTEMA6NI47 508 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 ZBTB39O15060 712 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 GRM6O15303 877 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 CSDE1O75534 798 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 RPA1P27694 616 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 TECP42680 631 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 RARRES1P49788 294 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 UBE3AQ05086 875 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 TFDP1Q14186 410 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 PDIA5Q14554 519 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 SPOUT1Q5T280 376 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 HAUS3Q68CZ6 603 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 TWF2Q6IBS0 349 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 CATSPER3Q86XQ3 398 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 TMEM143Q96AN5 459 aa14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 TYW1Q9NV66 732 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-205ENST00000553300 CARNS1A5YM72 827 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 H3BQV1 296 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 ZNF623O75123 536 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 SPATA31C1P0DKV0 1188 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 FGFR1P11362 822 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 BMP1P13497 986 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 LAG3P18627 525 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 FGFR4P22455 802 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 GJB2P29033 226 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 PHKA2P46019 1235 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 GATMP50440 423 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.074e-14■■■■□ 21.2
HNRNPC-205ENST00000553300 TFF2Q03403 129 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 NCBP1Q09161 790 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 RILPL1Q5EBL4 403 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 ZNF598Q86UK7 904 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 LRRC43Q8N309 656 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 KLHL23Q8NBE8 558 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 SPPL3Q8TCT6 385 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 CASD1Q96PB1 797 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 MRPL9Q9BYD2 267 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 ALG13Q9NP73 1137 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 SMC3Q9UQE7 1217 aa14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 PIN4Q9Y237 131 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-205ENST00000553300 ARID2Q68CP9 1835 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 CD2BP2O95400 341 aaKnown RBP14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 ITGB1P05556 798 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 TCEAL5Q5H9L2 206 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 C4orf32Q8N8J7 132 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 MCPH1Q8NEM0 835 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 PIGOQ8TEQ8 1089 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 PGBD4Q96DM1 585 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 NFKBIZQ9BYH8 718 aa14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 UBE2ZQ9H832 354 aaPredicted RBP14.63□□□□□ -0.07
HNRNPC-205ENST00000553300 XPNPEP1Q9NQW7 623 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms