RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 ADAM15Q13444 863 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 CTTNQ14247 550 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 PUS10Q3MIT2 529 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 RBM23Q86U06 439 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 ZNF598Q86UK7 904 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 TPH2Q8IWU9 490 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 DIS3L2Q8IYB7 885 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 SLFN12Q8IYM2 578 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 THNSL1Q8IYQ7 743 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 PRPF31Q8WWY3 499 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 TMEM143Q96AN5 459 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 NLRP4Q96MN2 994 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 TMEM117Q9H0C3 514 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 AAASQ9NRG9 546 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 BMP2KQ9NSY1 1161 aaPredicted RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 RAPGEFL1Q9UHV5 662 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 HOXA2O43364 376 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 DKC1O60832 514 aaKnown RBP eCLIP10.89□□□□□ -0.67
GCN1-208ENST00000551549 SLITRK3O94933 977 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 PHKA2P46019 1235 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 POLGP54098 1239 aaPredicted RBP10.89□□□□□ -0.67
GCN1-208ENST00000551549 ERVFC1P60507 584 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 TRIM29Q14134 588 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 CALCRLQ16602 461 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 LONRF3Q496Y0 759 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 CCDC83Q8IWF9 413 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 C4orf19Q8IY42 314 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 ABI1Q8IZP0 508 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 GJD3Q8N144 294 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 HELQQ8TDG4 1101 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 MICAL1Q8TDZ2 1067 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 SLC7A3Q8WY07 619 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
GCN1-208ENST00000551549 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
GCN1-208ENST00000551549 DHX33Q9H6R0 707 aaKnown RBP10.89□□□□□ -0.67
GCN1-208ENST00000551549 ZSWIM4Q9H7M6 989 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 IFT122Q9HBG6 1241 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 CHST12Q9NRB3 414 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 LIMCH1Q9UPQ0 1083 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 PIN4Q9Y237 131 aaKnown RBP10.89□□□□□ -0.67
GCN1-208ENST00000551549 COL4A3BPQ9Y5P4 624 aa10.89□□□□□ -0.67
GCN1-208ENST00000551549 WDR81Q562E7 1941 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 A0A087WWV3 80 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 FSCN2O14926 492 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 PER2O15055 1255 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 NEMFO60524 1076 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 GLP2RO95838 553 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 EOMESO95936 686 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 LAG3P18627 525 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 SFPQP23246 707 aaKnown RBP eCLIP10.88□□□□□ -0.67
GCN1-208ENST00000551549 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
GCN1-208ENST00000551549 RFC5P40937 340 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 TXKP42681 527 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 NDUFV1P49821 464 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 UBE3AQ05086 875 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 LAMTOR4Q0VGL1 99 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 EMC2Q15006 297 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 XKR9Q5GH70 373 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 TWF2Q6IBS0 349 aaKnown RBP10.88□□□□□ -0.67
GCN1-208ENST00000551549 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 CATSPER4Q7RTX7 472 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 LRRC43Q8N309 656 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 EFHBQ8N7U6 833 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 PSPC1Q8WXF1 523 aaKnown RBP10.88□□□□□ -0.67
GCN1-208ENST00000551549 LPPQ93052 612 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 PPP2R3CQ969Q6 453 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 MTMR9Q96QG7 549 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 KIF2CQ99661 725 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 HSD17B14Q9BPX1 270 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 TMEM60Q9H2L4 133 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 TLE6Q9H808 572 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 MINDY3Q9H8M7 445 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 DACT1Q9NYF0 836 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 PCDHA12Q9UN75 941 aa10.88□□□□□ -0.67
GCN1-208ENST00000551549 FAM86C2PA6NEL3 165 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 MEIS3P2A8K0S8 358 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 MBTPS2O43462 519 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 COL9A1P20849 921 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 HOXA11P31270 313 aaPredicted RBP10.87□□□□□ -0.67
GCN1-208ENST00000551549 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
GCN1-208ENST00000551549 PLCB3Q01970 1234 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 ZP2Q05996 745 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 SMAD4Q13485 552 aaKnown RBP10.87□□□□□ -0.67
GCN1-208ENST00000551549 SMAD2Q15796 467 aaKnown RBP10.87□□□□□ -0.67
GCN1-208ENST00000551549 CSPP1Q1MSJ5 1256 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 C8orf34Q49A92 452 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 PLPP4Q5VZY2 271 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 EXOC8Q8IYI6 725 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 VN1R2Q8NFZ6 395 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 MRPS27Q92552 414 aaKnown RBP10.87□□□□□ -0.67
GCN1-208ENST00000551549 MSLNLQ96KJ4 702 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 ZNF558Q96NG5 402 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
GCN1-208ENST00000551549 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms