RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 RB1P06400 928 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 CCNYL3P0C7X3 344 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 CA8P35219 290 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 EXOSC10Q01780 885 aaKnown RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 TRAF1Q13077 416 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 DRP2Q13474 957 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 SMAD4Q13485 552 aaKnown RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 RTN1Q16799 776 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 CEP55Q53EZ4 464 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 IER5Q5VY09 327 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 XRRA1Q6P2D8 792 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 ABHD15Q6UXT9 468 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 NPAS4Q8IUM7 802 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 THNSL1Q8IYQ7 743 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 CMTR2Q8IYT2 770 aaKnown RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 COLGALT1Q8NBJ5 622 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 GIMAP8Q8ND71 665 aaPredicted RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 ST13P5Q8NFI4 369 aaPredicted RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 CWH43Q9H720 699 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 NCOA5Q9HCD5 579 aaKnown RBP7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 RIC8AQ9NPQ8 531 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 PCDHB7Q9Y5E2 793 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 FRYLO94915 3013 aa7.78□□□□□ -1.16
PRPF40B-214ENST00000551320 IGLV3-22A0A075B6J6 115 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 DENND3A2RUS2 1198 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 TMEM221A6NGB7 291 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 RRN3P2A6NIE6 340 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 MEIS3P2A8K0S8 358 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 M0QZ92 97 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 M0R296 226 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 MEIS1O00470 390 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 ZBTB43O43298 467 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 ZNF862O60290 1169 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 CALM1P0DP23 149 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 CALM2P0DP24 149 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 CALM3P0DP25 149 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 CTHP32929 405 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 TECP42680 631 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 LIFRP42702 1097 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 SARSP49591 514 aaKnown RBP7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 GNAQP50148 359 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 AAMPQ13685 434 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 PRR16Q569H4 304 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 EFHBQ8N7U6 833 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 SMRP1Q8NCR6 262 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 LPPQ93052 612 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 PBXIP1Q96AQ6 731 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 TMEM87BQ96K49 555 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 NEK1Q96PY6 1258 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 MAP3K14Q99558 947 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 LZTS2Q9BRK4 669 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 ZNF302Q9NR11 478 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 GABBR1Q9UBS5 961 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 CACNA1HO95180 2353 aa7.77□□□□□ -1.17
PRPF40B-214ENST00000551320 SMIM35A0A1B0GVV1 85 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 C9IYK1 514 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 IPO5O00410 1097 aaKnown RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 GPR32O75388 356 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 ATG7O95352 703 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 C22orf31O95567 290 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 ASGR2P07307 311 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 SMARCA1P28370 1054 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 SREBF1P36956 1147 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 NT5C2P49902 561 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 NLRP11P59045 1033 aaKnown RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 CCT2P78371 535 aaKnown RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 PKN1Q16512 942 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 HERC4Q5GLZ8 1057 aaPredicted RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 CLLU1OSQ5K130 101 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 SYCE2Q6PIF2 218 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 TRIM67Q6ZTA4 783 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 Q6ZUG5 572 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 PLPPR4Q7Z2D5 763 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 SGMS1Q86VZ5 419 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 TMEM173Q86WV6 379 aaPredicted RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 KSR1Q8IVT5 923 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 HELQQ8TDG4 1101 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 ATP8B4Q8TF62 1192 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 BCL7CQ8WUZ0 217 aaPredicted RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 EDAQ92838 391 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 CDHR1Q96JP9 859 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 AIFM3Q96NN9 605 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 CASD1Q96PB1 797 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 TCF25Q9BQ70 676 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 ZNF577Q9BSK1 485 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 RGS18Q9NS28 235 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 EVA1BQ9NVM1 165 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 BARHL2Q9NY43 387 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 PRKAG3Q9UGI9 489 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 AKT3Q9Y243 479 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 SAMM50Q9Y512 469 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 FNDC1Q4ZHG4 1894 aaPredicted RBP7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 NFASCO94856 1347 aa7.76□□□□□ -1.17
PRPF40B-214ENST00000551320 IGKV6D-21A0A0A0MT36 114 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 LOC730098B7Z3J9 87 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 TRAK2O60296 914 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 HBP1O60381 514 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 B4GALT3O60512 393 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 EYA4O95677 639 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms