RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CSDE1O75534 798 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 XRCC6P12956 609 aaKnown RBP eCLIP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 CCDC85BQ15834 202 aaPredicted RBP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 PAN2Q504Q3 1202 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 CLP1Q92989 425 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 NACC1Q96RE7 527 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 ELAC1Q9H777 363 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 XPNPEP1Q9NQW7 623 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 LRWD1Q9UFC0 647 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 DBR1Q9UK59 544 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 STK24Q9Y6E0 443 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 PLXNA4Q9HCM2 1894 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 A0A0C4DFX4 3053 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 BRWD1Q9NSI6 2320 aa19.19■□□□□ 0.66
CHMP1A-208ENST00000550102 VPS37CA5D8V6 355 aaPredicted RBP19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 ASAP2O43150 1006 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 USO1O60763 962 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 MUTP22033 750 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 CCT6AP40227 531 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 PHKA2P46019 1235 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 PDIA5Q14554 519 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 MXD4Q14582 209 aaPredicted RBP19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 CATSPER4Q7RTX7 472 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 BRAPQ7Z569 592 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 IGSF22Q8N9C0 903 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 IFT122Q9HBG6 1241 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 LMCD1Q9NZU5 365 aa19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-208ENST00000550102 HOXA2O43364 376 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 LINC00271P0C7V0 271 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 SRGAP2CP0DJJ0 459 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 GATMP50440 423 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 FAM189BP81408 668 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 ATP2C1P98194 919 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 TFDP1Q14186 410 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 SRGAP1Q7Z6B7 1085 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 RNF149Q8NC42 400 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 MCPH1Q8NEM0 835 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 SNX29Q8TEQ0 813 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 INTS4Q96HW7 963 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 C11orf84Q9BUA3 381 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 CHST12Q9NRB3 414 aa19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 PIN4Q9Y237 131 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-208ENST00000550102 MYH11P35749 1972 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 ARHGEF35A5YM69 484 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 C5orf67F2Z3F1 127 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 H3BNC9 293 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 RB1P06400 928 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 FGFR1P11362 822 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 BMPR1AP36894 532 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 GPM6BQ13491 265 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 PTPROQ16827 1216 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 DTHD1Q6ZMT9 781 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 ECHDC2Q86YB7 292 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 POLR3FQ9H1D9 316 aaPredicted RBP19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 AGPAT5Q9NUQ2 364 aa19.16■□□□□ 0.66
CHMP1A-208ENST00000550102 A0A087WWV3 80 aa19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 A0A0U1RQF3 1178 aa19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 TBKBP1A7MCY6 615 aa19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 TWF2Q6IBS0 349 aaKnown RBP19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 RNF169Q8NCN4 708 aa19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 MRPL38Q96DV4 380 aaKnown RBP19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 PLVAPQ9BX97 442 aa19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 THEGQ9P2T0 379 aa19.15■□□□□ 0.66
CHMP1A-208ENST00000550102 ERLIN2O94905 339 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 SKIP12755 728 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 ARL2P36404 184 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 RAB27AP51159 221 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 CAPSQ13938 189 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 PCBP1Q15365 356 aaKnown RBP eCLIP19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 SKIV2LQ15477 1246 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 TIGD5Q53EQ6 642 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 FAM102BQ5T8I3 360 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 KRT79Q5XKE5 535 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 ARL6IP4Q66PJ3 421 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 ABI1Q8IZP0 508 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 ASAP3Q8TDY4 903 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 SNX21Q969T3 373 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 TRAIPQ9BWF2 469 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 TMEM117Q9H0C3 514 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 MINDY3Q9H8M7 445 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 MYO7AQ13402 2215 aa19.14■□□□□ 0.65
CHMP1A-208ENST00000550102 PP2D1A8MPX8 630 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 BMP15O95972 392 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 ATF7P17544 494 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 PTENP60484 403 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 POU5F1BQ06416 359 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 IL17AQ16552 155 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 PADI6Q6TGC4 694 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 ZNF598Q86UK7 904 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 IFNLR1Q8IU57 520 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 HSCBQ8IWL3 235 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 LRRC43Q8N309 656 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 P2RX5Q93086 422 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 KIAA1024Q9UPX6 916 aa19.13■□□□□ 0.65
CHMP1A-208ENST00000550102 VWA3AA6NCI4 1184 aa19.12■□□□□ 0.65
CHMP1A-208ENST00000550102 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms