RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SHCBP1Q8NEM2 672 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 FAM71BQ8TC56 605 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 MYO6Q9UM54 1294 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 RPS6KA5O75582 802 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 GGPS1O95749 300 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 DNM2P50570 870 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 GTF3C2Q8WUA4 911 aaPredicted RBP16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 ITIH6Q6UXX5 1313 aa16.71■□□□□ 0.27
CLPTM1-202ENST00000541297 K7ENM7 598 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 ADORA2AP29274 412 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 AMPD2Q01433 879 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 TMEM63BQ5T3F8 832 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 ANKEF1Q9NU02 776 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 SEL1LQ9UBV2 794 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 ZMYM2Q9UBW7 1377 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 STBD1O95210 358 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 LRRC31Q6UY01 552 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 OTUD6AQ7L8S5 288 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 FAM204AQ9H8W3 233 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 ZNF302Q9NR11 478 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 TRIM10Q9UDY6 481 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 TRAF3IP3Q9Y228 551 aa16.7■□□□□ 0.26
CLPTM1-202ENST00000541297 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 MAN2A1Q16706 1144 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 EDRF1Q3B7T1 1238 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 CYP26C1Q6V0L0 522 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 PARK7Q99497 189 aaKnown RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 MLXIPQ9HAP2 919 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 PDGFCQ9NRA1 345 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 TYW1Q9NV66 732 aaKnown RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 LARSQ9P2J5 1176 aaKnown RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 PDXKO00764 312 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 CETN3O15182 167 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 EIF3DO15371 548 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 TGFB1I1O43294 461 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 CALUO43852 315 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 PEX3P56589 373 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 NEDD9Q14511 834 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 CEP63Q96MT8 703 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 MYO1AQ9UBC5 1043 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 DOCK3Q8IZD9 2030 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 IGSF9BQ9UPX0 1349 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 GSTTP1A0A1W2PQM5 241 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 ATP4AP20648 1035 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 NOP2P46087 812 aaKnown RBP16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 WDR93Q6P2C0 686 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 RASAL3Q86YV0 1011 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 COPS5Q92905 334 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 CHP1Q99653 195 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 GUCA1BQ9UMX6 200 aa16.69■□□□□ 0.26
CLPTM1-202ENST00000541297 ENC1O14682 589 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 DKC1O60832 514 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 ATG7O95352 703 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 NR3C1P04150 777 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 TGFB3P10600 412 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 PLS3P13797 630 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 KRT9P35527 623 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 FKBP15Q5T1M5 1219 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 ARMCX2Q7L311 632 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 PLEKHA4Q9H4M7 779 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 A0A1W2PQC6 194 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 TUBBP07437 444 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 CASP4P49662 377 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 HSDL1Q3SXM5 330 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 DRC1Q96MC2 740 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 KIFC3Q9BVG8 833 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 MED4Q9NPJ6 270 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 CYP26B1Q9NR63 512 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 HDAC6Q9UBN7 1215 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 MORF4L1Q9UBU8 362 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 MAFBQ9Y5Q3 323 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-202ENST00000541297 TTC26A0AVF1 554 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 ANKRD65E5RJM6 399 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 SLC16A4O15374 487 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 RNF40O75150 1001 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 TRIM21P19474 475 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 METTL7BQ6UX53 244 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 STXBP4Q6ZWJ1 553 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 SAPCD2Q86UD0 394 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 SYCP3Q8IZU3 236 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms