RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
CCND1-204ENST00000539241 GCOM2Q9BZD3 368 aaPredicted RBP15.71■□□□□ 0.11
CCND1-204ENST00000539241 ENTPD7Q9NQZ7 604 aa15.71■□□□□ 0.11
CCND1-204ENST00000539241 SH2B1Q9NRF2 756 aaPredicted RBP15.71■□□□□ 0.11
CCND1-204ENST00000539241 MUTYHQ9UIF7 546 aa15.71■□□□□ 0.11
CCND1-204ENST00000539241 KCNJ14Q9UNX9 436 aa15.71■□□□□ 0.11
CCND1-204ENST00000539241 USP15Q9Y4E8 981 aaPredicted RBP15.71■□□□□ 0.11
CCND1-204ENST00000539241 KIAA1671Q9BY89 1806 aa15.71■□□□□ 0.1
CCND1-204ENST00000539241 IGKV6-21A0A0C4DH24 114 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 SLC37A4O43826 429 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
CCND1-204ENST00000539241 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
CCND1-204ENST00000539241 PPM1AP35813 382 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 PBX3P40426 434 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 DNM2P50570 870 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
CCND1-204ENST00000539241 LETM2Q2VYF4 491 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 HERC4Q5GLZ8 1057 aaPredicted RBP15.7■□□□□ 0.1
CCND1-204ENST00000539241 ZNF598Q86UK7 904 aaKnown RBP15.7■□□□□ 0.1
CCND1-204ENST00000539241 VN1R2Q8NFZ6 395 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 TCF25Q9BQ70 676 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 DACT1Q9NYF0 836 aa15.7■□□□□ 0.1
CCND1-204ENST00000539241 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
CCND1-204ENST00000539241 A0A087WZ62 844 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 CCDC194A0A1B0GVG4 234 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 CDKL5O76039 1030 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 EOMESO95936 686 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 ATF7P17544 494 aaPredicted RBP15.69■□□□□ 0.1
CCND1-204ENST00000539241 PSMC5P62195 406 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 KRT17Q04695 432 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 NECAB1Q8N987 351 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 HELQQ8TDG4 1101 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
CCND1-204ENST00000539241 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 NGRNQ9NPE2 291 aaKnown RBP15.69■□□□□ 0.1
CCND1-204ENST00000539241 SPG21Q9NZD8 308 aa15.69■□□□□ 0.1
CCND1-204ENST00000539241 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
CCND1-204ENST00000539241 FNDC1Q4ZHG4 1894 aaPredicted RBP15.69■□□□□ 0.1
CCND1-204ENST00000539241 LOC730098B7Z3J9 87 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 EML1O00423 815 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 MAFO75444 373 aaPredicted RBP15.68■□□□□ 0.1
CCND1-204ENST00000539241 SRGAP2BP0DMP2 458 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 SFPQP23246 707 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCND1-204ENST00000539241 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 ANO5Q75V66 913 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 TMC7Q7Z402 723 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 NEK8Q86SG6 692 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 ZNF410Q86VK4 478 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 RHPN2Q8IUC4 686 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
CCND1-204ENST00000539241 PHF7Q9BWX1 381 aaPredicted RBP15.68■□□□□ 0.1
CCND1-204ENST00000539241 MRPL9Q9BYD2 267 aaKnown RBP15.68■□□□□ 0.1
CCND1-204ENST00000539241 INO80BQ9C086 356 aaPredicted RBP15.68■□□□□ 0.1
CCND1-204ENST00000539241 KCNMB3Q9NPA1 279 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 CHST12Q9NRB3 414 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 STK36Q9NRP7 1315 aa15.68■□□□□ 0.1
CCND1-204ENST00000539241 HIDE1A8MVS5 230 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
CCND1-204ENST00000539241 XBP1P17861 261 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 TECP42680 631 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 PHKA2P46019 1235 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 ST3GAL1Q11201 340 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 PPP2R5CQ13362 524 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 KCNC3Q14003 757 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 CBX2Q14781 532 aaPredicted RBP15.67■□□□□ 0.1
CCND1-204ENST00000539241 TWF2Q6IBS0 349 aaKnown RBP15.67■□□□□ 0.1
CCND1-204ENST00000539241 PPP4R3AQ6IN85 833 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 TMEM184AQ6ZMB5 413 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 HFE2Q6ZVN8 426 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 SLC39A11Q8N1S5 342 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 SUSD6Q92537 303 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 TMX3Q96JJ7 454 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 FAM20AQ96MK3 541 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 VAV3Q9UKW4 847 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 PIN4Q9Y237 131 aaKnown RBP15.67■□□□□ 0.1
CCND1-204ENST00000539241 MUC6Q6W4X9 2439 aa15.67■□□□□ 0.1
CCND1-204ENST00000539241 TRIOO75962 3097 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 PLXNA4Q9HCM2 1894 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 DKC1O60832 514 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCND1-204ENST00000539241 P4HBP07237 508 aaKnown RBP15.66■□□□□ 0.1
CCND1-204ENST00000539241 QARSP47897 775 aaKnown RBP15.66■□□□□ 0.1
CCND1-204ENST00000539241 ANKRD54Q6NXT1 300 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 LLGL2Q6P1M3 1020 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 PIK3AP1Q6ZUJ8 805 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 CATSPER4Q7RTX7 472 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 KSR1Q8IVT5 923 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 CCDC83Q8IWF9 413 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 RSPH1Q8WYR4 309 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 EDAQ92838 391 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 SNX21Q969T3 373 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 RPGRIP1Q96KN7 1286 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 NLRP4Q96MN2 994 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 LLPHQ9BRT6 129 aaKnown RBP15.66■□□□□ 0.1
CCND1-204ENST00000539241 TRAIPQ9BWF2 469 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 CYP26B1Q9NR63 512 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
CCND1-204ENST00000539241 NT5C1B-RDH14C9J2C7 533 aa15.65■□□□□ 0.1
CCND1-204ENST00000539241 CCNT1O60563 726 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms