RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 KCTD1Q719H9 257 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 FRMD5Q7Z6J6 570 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
CHKA-204ENST00000528235 CLASRPQ8N2M8 674 aaKnown RBP6.38□□□□□ -1.39
CHKA-204ENST00000528235 KCNG4Q8TDN1 519 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 AFG1LQ8WV93 481 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 CTAGE1Q96RT6 745 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 PDCL3Q9H2J4 239 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 C1orf115Q9H7X2 142 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 IL1RAPL2Q9NP60 686 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 MTMR7Q9Y216 660 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 EXOC6BQ9Y2D4 811 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
CHKA-204ENST00000528235 ZBED9Q6R2W3 1325 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 RALGAPA1Q6GYQ0 2036 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 VPS13AQ96RL7 3174 aa6.38□□□□□ -1.39
CHKA-204ENST00000528235 GVINP1Q7Z2Y8 2422 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 A0A0A0MRY4 1105 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 SCO2A0A1W2PP80 73 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 C5orf67F2Z3F1 127 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 TGFBR3LH3BV60 316 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 DYRK3O43781 588 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 PDGFBP01127 241 aaPredicted RBP6.37□□□□□ -1.39
CHKA-204ENST00000528235 MMP1P03956 469 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 APPP05067 770 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 TRIM27P14373 513 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 TDO2P48775 406 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 COASYQ13057 564 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 MBTPS1Q14703 1052 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 KIAA0753Q2KHM9 967 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 CCDC96Q2M329 555 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 PLEKHG4Q58EX7 1191 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 CASC1Q6TDU7 716 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 SEPT14Q6ZU15 432 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 EFHBQ8N7U6 833 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 SMRP1Q8NCR6 262 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 DNERQ8NFT8 737 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 KAT2BQ92831 832 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 APBB2Q92870 758 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 MSLNLQ96KJ4 702 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 GSX2Q9BZM3 304 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 BOLA2Q9H3K6 86 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 MFSD1Q9H3U5 465 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 STX8Q9UNK0 236 aa6.37□□□□□ -1.39
CHKA-204ENST00000528235 USP15Q9Y4E8 981 aaPredicted RBP6.37□□□□□ -1.39
CHKA-204ENST00000528235 TPRP12270 2363 aaKnown RBP6.37□□□□□ -1.39
CHKA-204ENST00000528235 BAHCC1Q9P281 2608 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 EPG5Q9HCE0 2579 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 NFIBO00712 420 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 RGS9O75916 674 aaPredicted RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 ARIH2O95376 493 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 SLC3A2P08195 630 aaKnown RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 ATF7P17544 494 aaPredicted RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 NRIP1P48552 1158 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 ZNF200P98182 395 aaPredicted RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 TFAP4Q01664 338 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 BTG3Q14201 252 aaPredicted RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 PUM1Q14671 1186 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHKA-204ENST00000528235 LY6KQ17RY6 165 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 TRIM71Q2Q1W2 868 aaKnown RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 UTP14CQ5TAP6 766 aaKnown RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 PSAPL1Q6NUJ1 521 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 GIMAP6Q6P9H5 292 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 SLC30A10Q6XR72 485 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 RBM23Q86U06 439 aaKnown RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 TMEM57Q8N5G2 664 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 MICAL1Q8TDZ2 1067 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 NUDT8Q8WV74 236 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 ATP6V0A1Q93050 837 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 WNT8BQ93098 351 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 RMDN1Q96DB5 314 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 PUS7LQ9H0K6 701 aaKnown RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 DNAJB12Q9NXW2 375 aaKnown RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 CLEC1BQ9P126 229 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 PNMA2Q9UL42 364 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 BARX2Q9UMQ3 279 aaPredicted RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 TNNQ9UQP3 1299 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 MIA3Q5JRA6 1907 aa6.36□□□□□ -1.39
CHKA-204ENST00000528235 EP300Q09472 2414 aaPredicted RBP6.36□□□□□ -1.39
CHKA-204ENST00000528235 EVPLQ92817 2033 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 ADGRA3Q8IWK6 1321 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.35□□□□□ -1.39
CHKA-204ENST00000528235 C17orf102A2RUQ5 167 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 GSG1L2A8MUP6 293 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 CTSHP09668 335 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 H2AFB1P0C5Y9 115 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 H2AFB2P0C5Z0 115 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 ZNF286BP0CG31 522 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 SRGAP2BP0DMP2 458 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 NFKB1P19838 968 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 AFF1P51825 1210 aaKnown RBP6.35□□□□□ -1.39
CHKA-204ENST00000528235 RPS6P62753 249 aaKnown RBP6.35□□□□□ -1.39
CHKA-204ENST00000528235 ARHGAP1Q07960 439 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 ZKSCAN2Q63HK3 967 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 ADGRD2Q7Z7M1 963 aa6.35□□□□□ -1.39
CHKA-204ENST00000528235 SMAP1Q8IYB5 467 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms